<Clone: Contig-U04777-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U04777-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U04777-1

< more Chromosomal info >

Chromosome Number 5
Length 5062330
Start Poin 1,390,329
End Point 1,391,062
Strand PLUS

Sequence Contig-U04777-1

GAAAAAATTC AAAGAATTTC AGATTTAGTA GCAGCATATC AAAAAGTTTC
ATCATTTAAA AAGATAGAAA AGAAATTAAA TAATGGAAAA TCATATAAAA
TTAAAAAAAT ATTTTAATGA GAGGAAGATA TTATTATCCA GCTAAAGTTA
ATAGAAAGAG TGCATCACAT ATNACATTAA TTAAAAACAC AGCAATGAAT
ACATTTCAAA ATATAGAGGA AGCAACTGAT GAAGAAATCT ACAATAGAAT
GTACGCAGCC AGACAAAGAG AGAAAATGTT GAAAACAAGT GCTTTCGTTC
AATCCTTTTT GGGTATGGCT GGTCAAAGTT ACCAAAAAGC ATTACAAAAA
CATGGTTTAA CTTCAAGTGA TGGTACTTTT GAATATAATG AAGAAGATGA
TGAAGATTAT GAACCTTCTG AAAGTGATGA TGATGATGAT GAAGGTGAAC
AAAATGGCGA AGAAGAGGAT AATTCTGATA CTGAAGATGA AGAAGAACAA
CAATTAAAAC AACTTGAAGC TAAAAATGAA GAAGATGAAG AATTTGAAGA
ACAAGAAATA GATGAAGATG AAGAAGAAGT AGATGAGGAT GAAGAAAATG
GCGAAGATGA AGGTTTTGAA ATGGAAGATG ATTTTGAGAT TTTGAAGATT
CTGAATAAAA CTAAATAGTA ACAAAAAAAA AAAAAAAAAA ACAACTGTTC
TCATAAATAA TTCATTCATT TAAATTATTC A

Translated Amino Acid Sequence Contig-U04777-1

<All Frames> 
knsknfrfsssisksfii*kdrkeik*wkii*n*KNILMRGRYYYPAKVNRKSASHXTLI
KNTAMNTFQNIEEATDEEIYNRMYAARQREKMLKTSAFVQSFLGMAGQSYQKALQKHGLT
SSDGTFEYNEEDDEDYEPSESDDDDDEGEQNGEEEDNSDTEDEEEQQLKQLEAKNEEDEE
FEEQEIDEDEEEVDEDEENGEDEGFEMEDDFEILKILNKTK**qkkkkknncshk*fihl
nys


Homology Contig-U04777-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U04777-1 (Contig-U04777-1Q) /CSM_Contig/Conti...   563  e-161
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U11196-1 (Contig-U11196-1Q) /CSM_Contig/Conti...    36  0.051
Contig-U05597-1 (Contig-U05597-1Q) /CSM_Contig/Conti...    36  0.051
Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U13875-1 (Contig-U13875-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U12399-1 (Contig-U12399-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U12260-1 (Contig-U12260-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U11785-1 (Contig-U11785-1Q) /CSM_Contig/Conti...    34  0.20


Homology Contig-U04777-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(C84107) Dictyostelium discoideum slug cDNA, clone SSC788.        533   0.0    4
(AU071942) Dictyostelium discoideum slug cDNA, clone SSC788.      248   8e-78  2
(CG114439) PUFVJ66TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   0.34   2
(CT759584) Paramecium tetraurelia 5-PRIME EST from clone LK0...    48   0.48   1
(CP001139) Vibrio fischeri MJ11 chromosome I, complete seque...    48   0.48   1
(AC150889) Medicago truncatula chromosome 7 clone mte1-61j12...    36   0.85   5
(FG125745) LY_YIT_BG0260 German Cockroach Whole Organism cDN...    36   1.1    2
(CU929725) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   1.2    4
(AM685317) Entamoeba terrapinae GSS, clone terra124d10.q1k.        32   1.3    2
(DT599809) ram01-7ms1-p24 Ram01 Ribes americanum cDNA clone ...    34   1.3    2


Homology Contig-U04777-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


CP001614_3830(CP001614|pid:none) Teredinibacter turnerae T7901, ...    35   3.2
AE014188_417(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    33   9.2
AM398681_1484(AM398681|pid:none) Flavobacterium psychrophilum JI...    33   9.2


<Clone: Contig-U04777-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home