Homology Contig-U04777-1 vs DNA
Query= Contig-U04777-1 (Contig-U04777-1Q) /CSM_Contig/Contig-U04777-1Q.Seq.d
(731 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C84107) Dictyostelium discoideum slug cDNA, clone SSC788. 533 0.0 4
(AU071942) Dictyostelium discoideum slug cDNA, clone SSC788. 248 8e-78 2
(CG114439) PUFVJ66TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 0.34 2
(CT759584) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 0.48 1
(CP001139) Vibrio fischeri MJ11 chromosome I, complete seque... 48 0.48 1
(AC150889) Medicago truncatula chromosome 7 clone mte1-61j12... 36 0.85 5
(FG125745) LY_YIT_BG0260 German Cockroach Whole Organism cDN... 36 1.1 2
(CU929725) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.2 4
(AM685317) Entamoeba terrapinae GSS, clone terra124d10.q1k. 32 1.3 2
(DT599809) ram01-7ms1-p24 Ram01 Ribes americanum cDNA clone ... 34 1.3 2
(FP102511) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.9 1
(AC218274) Bos taurus clone CH240-289G12, WORKING DRAFT SEQU... 46 1.9 1
(AC172327) Bos taurus clone CH240-528H19, WORKING DRAFT SEQU... 46 1.9 1
(ER649239) SB_BBc16-M02.R SB_BBc Sorghum bicolor genomic 3',... 46 1.9 1
(DE965854) Macropus eugenii DNA, BAC clone: MEB1-169A18_F, 5... 46 1.9 1
(CK303341) SB02003A2F03.f2 normalized Keck-Tagu Library SB02... 46 1.9 1
(BM882146) rb26d03.y1 Meloidogyne incognita egg pAMP1 Bird M... 46 1.9 1
(BM774808) ra97h06.y1 Meloidogyne incognita egg pAMP1 Bird M... 46 1.9 1
(BI501832) rm05f08.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 46 1.9 1
(FK722267) av02100f02r1.1 Symbiotic sea anemone (Anemonia vi... 46 1.9 1
(AX535056) Sequence 83 from Patent WO02068633. 38 2.6 2
(AC196646) Zea mays chromosome 7 clone CH201-108J23; ZMMBBc0... 44 2.7 2
(AK056724) Homo sapiens cDNA FLJ32162 fis, clone PLACE6000325. 38 2.9 2
(AM677206) Entamoeba terrapinae GSS, clone terra129f11.q1k. 40 4.3 2
(CF942914) NcESTqac05f01.y1 Nc-1 Tachyzoite cDNA Library 2 N... 34 4.9 2
(AU060865) Dictyostelium discoideum slug cDNA, clone SLB781. 34 5.2 2
(BX323994) Zebrafish DNA sequence from clone CH211-273A5 in ... 40 6.4 5
(CU466275) Zebrafish DNA sequence from clone DKEY-156G19 in ... 44 7.4 1
(BX901970) Zebrafish DNA sequence from clone CH211-214I7 in ... 44 7.4 1
(BX323030) Zebrafish DNA sequence from clone DKEYP-77D7 in l... 44 7.4 1
(BX088703) Zebrafish DNA sequence from clone CH211-241D14 in... 44 7.4 1
(BX005426) Zebrafish DNA sequence from clone DKEY-1H24 in li... 44 7.4 1
(BX005343) Zebrafish DNA sequence from clone DKEY-29F2 in li... 44 7.4 1
(AJ233787) Carassius auratus gene encoding olfactory recepto... 44 7.4 1
(AF083078) Carassius auratus putative odorant receptor (GFA2... 44 7.4 1
(AF083077) Carassius auratus putative odorant receptor (GFA1... 44 7.4 1
(AC125346) Mus musculus BAC clone RP24-87B17 from chromosome... 44 7.4 1
(AC120420) Mus musculus chromosome 5, clone RP24-481P22, com... 44 7.4 1
(AC026424) Homo sapiens chromosome 5 clone CTD-2174D2, compl... 44 7.4 1
(AC010245) Homo sapiens chromosome 5 clone CTC-366B18, compl... 44 7.4 1
(AC008488) Homo sapiens chromosome 5 clone CTC-424O12, compl... 44 7.4 1
(AC006149) Homo sapiens PAC clone RP5-1078A23 from 7, comple... 44 7.4 1
(AC123318) Rattus norvegicus clone CH230-167F20, *** SEQUENC... 44 7.4 1
(AC114107) Rattus norvegicus clone CH230-23I11, *** SEQUENCI... 44 7.4 1
(AC096177) Rattus norvegicus clone CH230-11D4, *** SEQUENCIN... 44 7.4 1
(AC094311) Rattus norvegicus clone CH230-3G7, WORKING DRAFT ... 44 7.4 1
(EJ121269) 1092343373723 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.4 1
(DH697189) Rattus norvegicus DNA, BAC clone: RNB1-256A22, 3'... 44 7.4 1
(DE946371) Macropus eugenii DNA, BAC clone: MEB1-142L20_F, 5... 44 7.4 1
(EL830022) CBWN11790.b1 NICHD_XGC_tropTe1 Xenopus (Silurana)... 44 7.4 1
(DB752895) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB750557) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB743374) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB742637) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB738700) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB738429) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB736324) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB735796) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB734272) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(DB730213) Apis mellifera head cDNA, RIKEN full-length enric... 44 7.4 1
(CX963220) JGI_CAAO12362.fwd NIH_XGC_tropTe5 Xenopus (Silura... 44 7.4 1
(CX935220) JGI_CAAO4254.fwd NIH_XGC_tropTe5 Xenopus (Siluran... 44 7.4 1
(CX932271) JGI_CAAO2234.fwd NIH_XGC_tropTe5 Xenopus (Siluran... 44 7.4 1
(CT770150) Paramecium tetraurelia 5-PRIME EST from clone LK0... 44 7.4 1
(CT744445) Paramecium tetraurelia 5-PRIME EST from clone LK0... 44 7.4 1
(CJ743420) Ipomoea nil cDNA clone:jmsf27b08, 5' end. 44 7.4 1
(BI509738) BB170019B10C07.5 Bee Brain Normalized/Subtracted ... 44 7.4 1
(ES673408) CCAX1074.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 44 7.4 1
(AC219204) Solanum lycopersicum chromosome 6 clone C06HBa002... 42 7.6 2
(AC147119) Pan troglodytes BAC clone CH251-518N19 from Y, co... 40 8.0 4
(AC146333) Medicago truncatula clone mth2-8d3, complete sequ... 34 9.7 5
>(C84107) Dictyostelium discoideum slug cDNA, clone SSC788.
Length = 619
Score = 533 bits (269), Expect(4) = 0.0
Identities = 271/272 (99%)
Strand = Plus / Plus
Query: 116 aatgagaggaagatattattatccagctaaagttaatagaaagagtgcatcacatatnac 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 aatgagaggaagatattattatccagctaaagttaatagaaagagtgcatcacatatcac 60
Query: 176 attaattaaaaacacagcaatgaatacatttcaaaatatagaggaagcaactgatgaaga 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaattaaaaacacagcaatgaatacatttcaaaatatagaggaagcaactgatgaaga 120
Query: 236 aatctacaatagaatgtacgcagccagacaaagagagaaaatgttgaaaacaagtgcttt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatctacaatagaatgtacgcagccagacaaagagagaaaatgttgaaaacaagtgcttt 180
Query: 296 cgttcaatcctttttgggtatggctggtcaaagttaccaaaaagcattacaaaaacatgg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgttcaatcctttttgggtatggctggtcaaagttaccaaaaagcattacaaaaacatgg 240
Query: 356 tttaacttcaagtgatggtacttttgaatata 387
||||||||||||||||||||||||||||||||
Sbjct: 241 tttaacttcaagtgatggtacttttgaatata 272
Score = 129 bits (65), Expect(4) = 0.0
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 450 caaaatggcgaagaagaggataattctgatactgaagatgaagaagaacaacaattaaaa 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caaaatggcgaagaagaggataattctgatactgaagatgaagaagaacaacaattaaaa 394
Query: 510 caact 514
|||||
Sbjct: 395 caact 399
Score = 79.8 bits (40), Expect(4) = 0.0
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 692 caactgttctcataaataattcattcatttaaattattca 731
||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 caactgttctcataaataattcattcatttaaattattca 608
Score = 69.9 bits (35), Expect(4) = 0.0
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 638 gattttgaagattctgaataaaactaaatagtaac 672
|||||||||||||||||||||||||||||||||||
Sbjct: 515 gattttgaagattctgaataaaactaaatagtaac 549
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 687,397,160
Number of extensions: 45183708
Number of successful extensions: 3791552
Number of sequences better than 10.0: 71
Length of query: 731
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 707
Effective length of database: 99,340,224,878
Effective search space: 70233538988746
Effective search space used: 70233538988746
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home