Dictyostelium discoideum cDNA Contig-U04737-1

Assembled

Chromosomal Location of Contig-U04737-1

Sequence Contig-U04737-1

AATTTTTATT TAAATATTCA ATCATCTGGA AATTTATTAA TTGATCGTCT
TTTAGATTTA AATTATACTT CTATCAAAGT CTCTGGTGCA AAATTATTTT
TAACAAGATT TAATCAACTA GTTTCAACAC CTGGTATTGA ATATATTGAT
TCACCAATTC ATATAATGGA AAATGAACCA ATTGAAAATA TTAAAACATT
TTGTAACAAT ATTCAAAATA ATAATTCAAT TTTAAAATTA TCAATTTCTG
GTGGTTTATA TAATAATTTT AATTATAATA ATGATAATAA CAATAATAAT
GAAAATGTTT TAAATTCACA ATTAAATTTA ATAATTTTAT CAAATTTATT
TTCAAAAGTT TTTTATTATA ATAATACTAT AAAATCATTA TGTATTAATA
AATTACCTAT TTTAACATCA GAATTTTTTA ATTCTTTAAA ATCAAATTCA
ACAATTGATC ATTTAGAATT AACTGATGGT ACATTAAATT TAGATTTATT
AAATGATCTT TCAAATTTAT TAATAACAAC ATCATCATGG CCATGTGGAA
ATGGTGAAAT ATTAAATAAA T

Translated Amino Acid Sequence Contig-U04737-1

NFYLNIQSSGNLLIDRLLDLNYTSIKVSGAKLFLTRFNQLVSTPGIEYIDSPIHIMENEP
IENIKTFCNNIQNNNSILKLSISGGLYNNFNYNNDNNNNNENVLNSQLNLIILSNLFSKV
FYYNNTIKSLCINKLPILTSEFFNSLKSNSTIDHLELTDGTLNLDLLNDLSNLLITTSSW
PCGNGEILNK

Homology Contig-U04737-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U04737-1 (Contig-U04737-1Q) /CSM_Contig/Conti...   509  e-145
Contig-U14197-1 (Contig-U14197-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U11862-1 (Contig-U11862-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U09824-1 (Contig-U09824-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U06917-1 (Contig-U06917-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11731-1 (Contig-U11731-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U11132-1 (Contig-U11132-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U04907-1 (Contig-U04907-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U02230-1 (Contig-U02230-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U12263-1 (Contig-U12263-1Q) /CSM_Contig/Conti...    30  2.5

Homology Contig-U04737-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU071821) Dictyostelium discoideum slug cDNA, clone SSC580.      365   1e-96  1
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    32   0.001  10
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    34   0.009  8
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   0.039  16
(EJ527452) 1092955195668 Global-Ocean-Sampling_GS-29-01-01-1...    36   0.070  3
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   0.093  11
(DQ832717) Phytophthora sojae mitochondrion, complete genome.      38   0.12   5
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         40   0.13   16
(EK368030) 1095469405597 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.19   2
(AL844506) Plasmodium falciparum chromosome  7.                    40   0.22   14

Homology Contig-U04737-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP008983_69(AP008983|pid:none) Clostridium phage c-st genomic DN...    38   0.22
CP000102_568(CP000102|pid:none) Methanosphaera stadtmanae DSM 30...    35   1.9
CR380952_382(CR380952|pid:none) Candida glabrata strain CBS138 c...    34   3.2
AE014186_457(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    33   4.2
CP000438_779(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1...    33   7.2
CP000744_903(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp...    33   7.2
AE004091_4179(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co...    33   7.2
AB083545_1(AB083545|pid:none) Bacillus cereus celR gene for tran...    33   7.2
CP001283_5173(CP001283|pid:none) Bacillus cereus AH820, complete...    32   9.4
AJ000394_1(AJ000394|pid:none) Bacillus cereus celR (partial), or...    32   9.4