<Clone: Contig-U04705-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U04705-1

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Assembled

Chromosomal Location of Contig-U04705-1

Chromosome Number	6
Length	3595308
Start Poin	1,054,823
End Point	1,055,657
Strand	PLUS

Sequence Contig-U04705-1

AAATCTAAAG GATAAAAATG GAATTTAAAA AGATTTTAAT AGTAACTATA
ATTTTTATTG AAATTGTTTT TGGTGGTGGA AATCCAATTT TCTTAGAAAA
TAAAATTAGT TTGGGAAAGA ATCAATTACA AGCTAATTAT CCAGTATTTG
ATATTCCAGC TAATTATGTA ACAATTTTTA CCTTAAAAAT TGATGATTCA
ATTAAAAATT CAGATATTAA TATTAATATT GGTTCACAAA AAGAGAATGG
TAATGATTTA ATTTTATTAC AATTTAATGA ATTAAATTAT GTTCAAGGAA
ATACACCATT CTTAGTTCAA CTATGTACAA ATTCAGATGA AGAATTATTT
AATATAACAT GTTTAAATTA TGATAATTCT GATTGTAAAC TATCAATTTC
AGTCAATGCA TCAAATTCAA AAAGTTTTTG TTCTCAAACT CTTGATACAT
CCACTTTTGA TGAATTTTTA AAAAACTTTT TCGATTTTGG TTTCCCACAA
CTTGGTCAAT TTTCTAATGA AAATCAACCA CAACAACAAC CACAACAACA
ACCACCACCA CAACAACAAC CACCACAGCA AGGACAAGAA GAACAGGTAC
AAGGACAACA ACAACAACAA CAACAAGAAC AATCAAATGG AAACCAACAA
CAACAAANNC AAGATAATAG TGAAGATAAT GGTGAATTAA GACCTCTAAT
TAAAAGCCAA CAACAACAAA ATCAACCAAA ATTGAAAATA TCAAGATTTA
TTTATGAAAC TAGTAATTGG TTTAATAATT TTTTTAAAAA TAATTTTTAA
AAAAATAATA ATAATAATAA ATTTAAAAAA AAAA

Translated Amino Acid Sequence Contig-U04705-1

<All Frames>

i*RIKMEFKKILIVTIIFIEIVFGGGNPIFLENKISLGKNQLQANYPVFDIPANYVTIFT
LKIDDSIKNSDININIGSQKENGNDLILLQFNELNYVQGNTPFLVQLCTNSDEELFNITC
LNYDNSDCKLSISVNASNSKSFCSQTLDTSTFDEFLKNFFDFGFPQLGQFSNENQPQQQP
QQQPPPQQQPPQQGQEEQVQGQQQQQQQEQSNGNQQQQXQDNSEDNGELRPLIKSQQQQN
QPKLKISRFIYETSNWFNNFFKNNF*knnnnnkfkkk

Homology Contig-U04705-1 vs CSM-Contig

<more CONTIG info>

Sequences producing significant alignments:                        (bits)  Value


Contig-U04705-1 (Contig-U04705-1Q) /CSM_Contig/Conti...  1039  0.0
Contig-U07050-1 (Contig-U07050-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U12007-1 (Contig-U12007-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U13963-1 (Contig-U13963-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U13284-1 (Contig-U13284-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U13001-1 (Contig-U13001-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U12562-1 (Contig-U12562-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U12080-1 (Contig-U12080-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U11933-1 (Contig-U11933-1Q) /CSM_Contig/Conti...    38  0.015

Homology Contig-U04705-1 vs DNA

<more DNA info>

Sequences producing significant alignments:                  (bits) Value  N


(C93145) Dictyostelium discoideum slug cDNA, clone SSM679.        624   0.0    2
(C90542) Dictyostelium discoideum slug cDNA, clone SSI702.        539   0.0    2
(C90722) Dictyostelium discoideum slug cDNA, clone SSJ870.        454   e-176  2
(C84162) Dictyostelium discoideum slug cDNA, clone SSC389.        256   e-153  4
(AU073904) Dictyostelium discoideum slug cDNA, clone SSI702.      476   e-130  1
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    38   2e-04  14
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   3e-04  16
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         34   6e-04  17
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont...    44   0.001  9
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    38   0.002  12

Homology Contig-U04705-1 vs Protein

<more Protein info>

Sequences producing significant alignments:                      (bits) Value


AE014185_221(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    36   1.4
BX842648_292(BX842648|pid:none) Bdellovibrio bacteriovorus compl...    36   1.8
CP000551_1204(CP000551|pid:none) Prochlorococcus marinus str. AS...    33   8.9

<Clone: Contig-U04705-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home