Dictyostelium discoideum cDNA Contig-U04637-1

Assembled

Chromosomal Location of Contig-U04637-1

Sequence Contig-U04637-1

CTTTTTTGTT ATTAATTTTC ATTTCCATAT TAATTTTTTG AAAAAAAAAA
AAAAGTAAAA AATTGTTTAG AAAAAAAAAA AAATAAAATA AAAAGTTGTT
TAAAAAAAAA AAAAATGTTT AGATTTTTAT TTGTAATCAT TGTAATATTA
ATTGCAATTT CGGGTAATAG TATTGTTTCC TCAAATGAAG TTGCCCAATG
TGATGTTTGT AATTATTTAG TAACAATGGT AGAAGTTTTC GTTGAACAAA
ATAGAAGTGA AACTTATATT TCAAACTCTC TTGAAAAAGT TTGTGAAATC
ATTCCAAGAG AAGATTATAA ATCAACTTGT AGATCAATTG TTTTAGCATA
TACAAAAGAT ATTATTCAAT TAATTATTAA TAGAGAACCA TCAGAAAAAA
TTTGTCAAGA GATTAAAGCT TGTCCATTAC CAACCCCTTC TCCATCGCCA
TCCAAACAAG TTAAACCAAA AAGAAATGAA GATGATGCTC TACAATGTAC
AATTTGTAAA TTGGTTGCCA CTAAATTAGA AGAGTACATT CAATCAAATA
AAACCATTGA AGAGATTGAA AAATGAATTG GATGATTTCT GTAAAATTGC
TTTTGAAAAA GATCCAACCC AATGCCAAGG TTTTGTACAA CAATATGTTC
CAATGATTTT ATCTTTTATC AAGAGTAAAA AGAGGATCCA ACTCAAGCTT
GCATTAAATT AAAATTCTGT ACATCTTCAA GAGTAACTAA AGCAATTCTT
AGTCATCATG TTTTGATTAA TAAGAATTAT TAAAACATTA ATTAAAAAAA
TAAAAAAATA AAAAATAAAA AATAAATAAT AAAGAAATAA TAAAAATTTA
AATAAAATCT ATCTATCCTA TCCATGTATA TACATAAATA AAAA

Translated Amino Acid Sequence Contig-U04637-1

lfcy*fsfpy*FFEKKKKVKNCLEKKKNKIKSCLKKKKMFRFLFVIIVILIAISGNSIVS
SNEVAQCDVCNYLVTMVEVFVEQNRSETYISNSLEKVCEIIPREDYKSTCRSIVLAYTKD
IIQLIINREPSEKICQEIKACPLPTPSPSPSKQVKPKRNEDDALQCTICKLVATKLEEYI
QSNKTIEEIEK*ig*fl*ncf*krsnpmprfctticsndfifyqe*kedptqaciklkfc
tssrvtkailshhvlinkny*nin*knkkiknkk*iikk**kfk*nlsilsmyihk*k

Homology Contig-U04637-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U04637-1 (Contig-U04637-1Q) /CSM_Contig/Conti...  1342  0.0
Contig-U00307-1 (Contig-U00307-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U11831-1 (Contig-U11831-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U11448-1 (Contig-U11448-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U09552-1 (Contig-U09552-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U07096-1 (Contig-U07096-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U04851-1 (Contig-U04851-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Conti...    36  0.063
Contig-U14173-1 (Contig-U14173-1Q) /CSM_Contig/Conti...    34  0.25

Homology Contig-U04637-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C90721) Dictyostelium discoideum slug cDNA, clone SSJ869.        618   0.0    3
(AU038197) Dictyostelium discoideum slug cDNA, clone SSH403.      466   0.0    3
(C94127) Dictyostelium discoideum slug cDNA, clone SSG441.        383   0.0    3
(AU038122) Dictyostelium discoideum slug cDNA, clone SSH302.      351   0.0    3
(C84016) Dictyostelium discoideum slug cDNA, clone SSC244.        321   0.0    3
(AU039174) Dictyostelium discoideum slug cDNA, clone SSM477.      289   0.0    3
(AU036970) Dictyostelium discoideum slug cDNA, clone SSB889.      278   e-132  2
(AU072492) Dictyostelium discoideum slug cDNA, clone SSE704.      339   1e-88  1
(AU071610) Dictyostelium discoideum slug cDNA, clone SSB889.      250   8e-62  1
(GC759133) Sequence 74378 from patent US 6812339.                  50   1e-04  2

Homology Contig-U04637-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC080997_1(BC080997|pid:none) Xenopus laevis MGC80725 protein, m...    64   9e-09
BC054988_1(BC054988|pid:none) Xenopus laevis hypothetical protei...    62   3e-08
AF175768_1(AF175768|pid:none) Dictyostelium discoideum SAPLIP C ...    61   6e-08
AF196308_1(AF196308|pid:none) Naegleria fowleri naegleriapore A ...    60   1e-07
U66367_1(U66367|pid:none) Dictyostelium discoideum SapA (sapA) m...    60   1e-07
AF196309_1(AF196309|pid:none) Naegleria fowleri naegleriapore B ...    60   1e-07
AC116956_84(AC116956|pid:none) Dictyostelium discoideum chromoso...    57   8e-07
DQ363441_1(DQ363441|pid:none) Ictalurus punctatus clone C111BF07...    57   1e-06
BC119540_1(BC119540|pid:none) Mus musculus prosaposin-like 1, mR...    56   1e-06
(Q8C1C1) RecName: Full=Proactivator polypeptide-like 1; Contains...    56   1e-06