Homology Contig-U04637-1 vs DNA
Query= Contig-U04637-1 (Contig-U04637-1Q) /CSM_Contig/Contig-U04637-1Q.Seq.d
(894 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C90721) Dictyostelium discoideum slug cDNA, clone SSJ869. 618 0.0 3
(AU038197) Dictyostelium discoideum slug cDNA, clone SSH403. 466 0.0 3
(C94127) Dictyostelium discoideum slug cDNA, clone SSG441. 383 0.0 3
(AU038122) Dictyostelium discoideum slug cDNA, clone SSH302. 351 0.0 3
(C84016) Dictyostelium discoideum slug cDNA, clone SSC244. 321 0.0 3
(AU039174) Dictyostelium discoideum slug cDNA, clone SSM477. 289 0.0 3
(AU036970) Dictyostelium discoideum slug cDNA, clone SSB889. 278 e-132 2
(AU072492) Dictyostelium discoideum slug cDNA, clone SSE704. 339 1e-88 1
(AU071610) Dictyostelium discoideum slug cDNA, clone SSB889. 250 8e-62 1
(GC759133) Sequence 74378 from patent US 6812339. 50 1e-04 2
(GC759132) Sequence 74377 from patent US 6812339. 50 1e-04 2
(DJ441102) Breast Cancer Biomarkers. 54 0.009 1
(DJ441101) Breast Cancer Biomarkers. 54 0.009 1
(CS200153) Sequence 34 from Patent WO2005106044. 54 0.009 1
(CS200152) Sequence 33 from Patent WO2005106044. 54 0.009 1
(AL356095) Human DNA sequence from clone RP11-369J21 on chro... 54 0.009 1
(AC145402) Gorilla gorilla gorilla clone CH255-181N17, WORKI... 54 0.009 1
(AL357792) Human DNA sequence *** SEQUENCING CANCELLED *** f... 54 0.009 1
(AC012043) Homo sapiens chromosome 10 clone RP11-131C15, WOR... 54 0.009 1
(AC139722) Homo sapiens BAC clone RP11-100N20 from 4, comple... 50 0.080 4
(AC162397) Bos taurus clone CH240-120B13, WORKING DRAFT SEQU... 38 0.082 5
(GC698670) Sequence 13915 from patent US 6812339. 50 0.087 4
(AC176352) Strongylocentrotus purpuratus clone R3-3053B20, W... 50 0.15 1
(AC015949) Homo sapiens chromosome 4 clone RP11-110P12 map 4... 50 0.15 1
(AL385453) Medicago truncatula EST MtBC28F08F1 : T3 end of c... 50 0.15 1
(AJ504348) Medicago truncatula EST, clone mtgmadc120046e02. 50 0.15 1
(AJ504225) Medicago truncatula EST, clone mtgmadc120045a08. 50 0.15 1
(AJ503988) Medicago truncatula EST, clone mtgmadc120040h06. 50 0.15 1
(AJ502580) Medicago truncatula EST, clone mtgmadc120022g02. 50 0.15 1
(AJ502273) Medicago truncatula EST, clone mtgmadc120018g06. 50 0.15 1
(AJ501069) Medicago truncatula EST, clone mtgmadc120002d09. 50 0.15 1
(BQ124772) EST610360 GLSD Medicago truncatula cDNA clone pGL... 50 0.15 1
(BI263676) NF088F11PL1F1095 Phosphate starved leaf Medicago ... 50 0.15 1
(BI262914) NF026C04PL1F1034 Phosphate starved leaf Medicago ... 50 0.15 1
(BG588555) EST490364 MHRP- Medicago truncatula cDNA clone pM... 50 0.15 1
(BF651234) NF108H09EC1F1078 Elicited cell culture Medicago t... 50 0.15 1
(BF648186) NF038E12EC1F1098 Elicited cell culture Medicago t... 50 0.15 1
(BF638975) NF063E10PL1F1081 Phosphate starved leaf Medicago ... 50 0.15 1
(BF638705) NF063H02PL1F1026 Phosphate starved leaf Medicago ... 50 0.15 1
(BF638451) NF057H07PL1F1062 Phosphate starved leaf Medicago ... 50 0.15 1
(BF638400) NF045G07PL1F1054 Phosphate starved leaf Medicago ... 50 0.15 1
(BE941652) EST421231 MGHG Medicago truncatula cDNA clone pMG... 50 0.15 1
(BE941331) EST420910 MGHG Medicago truncatula cDNA clone pMG... 50 0.15 1
(BE239608) EST403657 MHRP- Medicago truncatula cDNA clone pM... 50 0.15 1
(AW584656) N210758e MHAM Medicago truncatula/Glomus versifor... 50 0.15 1
(AW573786) EST316377 GVN Medicago truncatula cDNA clone pGVN... 50 0.15 1
(EY478749) METBH76TF JCVI-MT3 Medicago truncatula cDNA 5', m... 50 0.15 1
(AM454694) Vitis vinifera contig VV78X136186.17, whole genom... 44 0.24 4
(AZ929368) 479.dif25d11.s1 Saccharomyces kluyveri Lachancea ... 48 0.59 1
(DE288676) Bombyx mori genomic DNA, BAC clone:BES_017_J20. 48 0.59 1
(CK558890) rswpb0_000790.y1 swp Bombyx mori cDNA, mRNA seque... 48 0.59 1
(AC187371) Pan troglodytes BAC clone CH251-521J10 from chrom... 38 0.65 6
(CP001283) Bacillus cereus AH820, complete genome. 34 0.97 2
(AE017355) Bacillus thuringiensis serovar konkukian str. 97-... 34 0.97 2
(AE017225) Bacillus anthracis str. Sterne, complete genome. 34 0.97 2
(AE017334) Bacillus anthracis str. 'Ames Ancestor', complete... 34 0.97 2
(AE016879) Bacillus anthracis str. Ames, complete genome. 34 0.97 2
(EU093669) Synthetic construct Bacillus anthracis clone FLH2... 34 1.6 2
(EK465395) 1095469420483 Global-Ocean-Sampling_GS-32-01-01-1... 36 1.7 2
(EK464286) 1095469411939 Global-Ocean-Sampling_GS-32-01-01-1... 36 1.7 2
(CU760392) A BAC library has been constructed from PN40024 g... 34 1.7 3
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 32 2.1 11
(AC158599) Mus musculus 10 BAC RP23-122O12 (Roswell Park Can... 38 2.3 6
(X96557) P.tetraurlia epsilon-51D gene. 46 2.3 1
(AC148536) Macaca mulatta clone CH250-68D21, WORKING DRAFT S... 46 2.3 1
(AC139119) Didelphis virginiana clone LB3-157G8, WORKING DRA... 46 2.3 1
(BH429406) BOGLO12TR BOGL Brassica oleracea genomic clone BO... 46 2.3 1
(EL662891) AGENCOURT_103353065 NICHD_XGC_tropInt_60 Xenopus ... 46 2.3 1
(DV569274) Pf_IL_289G07_TriplEx-5LD Flounder IL Induced Live... 46 2.3 1
(BI221369) 602938921F1 NCI_CGAP_Li9 Mus musculus cDNA clone ... 46 2.3 1
(AC144478) Medicago truncatula clone mth2-20b20, complete se... 42 3.0 8
(AC209103) Populus trichocarpa clone POP056-L16, complete se... 34 4.1 5
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 38 4.7 10
(AC130747) Rattus norvegicus clone CH230-40M2, *** SEQUENCIN... 38 6.3 6
(EJ848354) 1093017867971 Global-Ocean-Sampling_GS-30-02-01-1... 34 6.4 2
(AL954843) Zebrafish DNA sequence from clone DKEY-149K8 Cont... 38 8.7 6
(BX936460) Zebrafish DNA sequence from clone CH211-69N2 in l... 44 9.1 1
(BX649457) Zebrafish DNA sequence from clone DKEYP-87E7 in l... 44 9.1 1
(AC186833) Gallus gallus BAC clone CH261-100K21 from chromos... 44 9.1 1
(BV024473) S212P60365FE6.T0 CZECHII/Ei Mus musculus STS geno... 44 9.1 1
(BX000428) Mouse DNA sequence from clone RP23-474G7 on chrom... 44 9.1 1
(AL626783) Mouse DNA sequence from clone RP23-406B13 on chro... 44 9.1 1
(AC147232) Mus musculus BAC clone RP23-311C15 from 7, comple... 44 9.1 1
(AC138678) Mus musculus chromosome 7, clone RP23-18B20, comp... 44 9.1 1
(AC128738) Mus musculus BAC clone RP24-106M4 from chromosome... 44 9.1 1
(AM481842) Vitis vinifera contig VV78X184360.5, whole genome... 44 9.1 1
(AM462900) Vitis vinifera contig VV78X056435.6, whole genome... 44 9.1 1
(AL033503) C.albicans cosmid Ca49C4. 44 9.1 1
(AF015306) Candida albicans small GTP-binding protein SEC4p ... 44 9.1 1
(AC232554) Brassica rapa subsp. pekinensis clone KBrH013I08,... 44 9.1 1
(X96400) P.tetraurelia alpha-51D gene. 44 9.1 1
(X85135) P.tetraurelia alpha-51D-gene for immobilization ant... 44 9.1 1
(AC121743) Rattus norvegicus clone CH230-99O14, *** SEQUENCI... 44 9.1 1
(AC111858) Rattus norvegicus clone CH230-203J17, WORKING DRA... 44 9.1 1
(AC101569) Mus musculus clone RP23-196G11, LOW-PASS SEQUENCE... 44 9.1 1
(AC092514) Papio anubis clone RP41-56L12, WORKING DRAFT SEQU... 44 9.1 1
(CU463823) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 9.1 1
(CU062654) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 9.1 1
(BX572088) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 44 9.1 1
(AC233993) Gallus gallus chromosome Z clone CH261-174G3, WOR... 44 9.1 1
(EK337800) 1095467049317 Global-Ocean-Sampling_GS-31-01-01-1... 44 9.1 1
(ED408267) AUAC-aai58e05.g1 Ascaris suum whole genome shotgu... 44 9.1 1
(DX205557) OR_ABa0076E05.f OR_ABa Oryza ridleyi genomic clon... 44 9.1 1
(CU210529) Equus caballus GSS, BAC clone CH241-329H11, SP6 e... 44 9.1 1
(DW266871) UI-S-GN1-abr-k-10-0-UI.s1 UI-S-GN1 Euprymna scolo... 44 9.1 1
(BM161332) EST563855 PyBS Plasmodium yoelii yoelii cDNA clon... 44 9.1 1
(BB978665) Plasmodium berghei str. ANKA cDNA clone: OK008713... 44 9.1 1
(FK082844) XABT137849.g1 Gateway compatible cien cDNA librar... 44 9.1 1
(CP001091) Actinobacillus pleuropneumoniae serovar 7 str. AP... 44 9.1 1
(CP000687) Actinobacillus pleuropneumoniae serovar 3 str. JL... 44 9.1 1
(AE017340) Idiomarina loihiensis L2TR, complete genome. 44 9.1 1
(ED561295) MUGQ_CH252P140J12Sp6_CN140_040 CHORI-252 Vervet M... 34 10.0 3
>(C90721) Dictyostelium discoideum slug cDNA, clone SSJ869.
Length = 587
Score = 618 bits (312), Expect(3) = 0.0
Identities = 336/344 (97%)
Strand = Plus / Plus
Query: 229 gtagaagttttcgttgaacaaaatagaagtgaaacttatatttcaaactctcttgaaaaa 288
|||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||
Sbjct: 1 gtagaagttttcgttgaacaaaatggaggtgaaccttatatttcaaactctctggaaaaa 60
Query: 289 gtttgtgaaatcattccaagagaagattataaatcaacttgtagatcaattgttttagca 348
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 gtttgtgaaatcattccaggagaagattttaaatcaacttgtagatcaattgttttagca 120
Query: 349 tatacaaaagatattattcaattaattattaatagagaaccatcagaaaaaatttgtcaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatacaaaagatattattcaattaattattaatagagaaccatcagaaaaaatttgtcaa 180
Query: 409 gagattaaagcttgtccattaccaaccccttctccatcgccatccaaacaagttaaacca 468
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 gagattaaagcttgtccaataccaaccccatctccatcgccatccaaacaagttaaacca 240
Query: 469 aaaagaaatgaagatgatgctctacaatgtacaatttgtaaattggttgccactaaatta 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagaaatgaagatgatgctctacaatgtacaatttgtaaattggttgccactaaatta 300
Query: 529 gaagagtacattcaatcaaataaaaccattgaagagattgaaaa 572
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagagtacattcaatcaaataaaaccattgaagagattgaaaa 344
Score = 226 bits (114), Expect(3) = 0.0
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 679 aaagaggatccaactcaagcttgcattaaattaaaattctgtacatcttcaagagtaact 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aaagaggatccaactcaagcttgcattaaattaaaattctgtacatcttcaagagtaact 507
Query: 739 aaagcaattcttagtcatcatgttttgattaataagaattattaaaacattaat 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaagcaattcttagtcatcatgttttgattaataagaattattaaaacattaat 561
Score = 218 bits (110), Expect(3) = 0.0
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 570 aaaatgaattggatgatttctgtaaaattgcttttgaaaaagatccaacccaatgccaag 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaaatgaattggatgatttctgtaaaattgcttttgaaaaagatccaacccaatgccaag 400
Query: 630 gttttgtacaacaatatgttccaatgattttatcttttatcaagagtaaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gttttgtacaacaatatgttccaatgattttatcttttatcaagagtaaa 450
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,038,080,000
Number of extensions: 64898972
Number of successful extensions: 5482471
Number of sequences better than 10.0: 112
Length of query: 894
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 870
Effective length of database: 99,340,224,878
Effective search space: 86425995643860
Effective search space used: 86425995643860
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home