Dictyostelium discoideum cDNA Contig-U04608-1

Assembled

Chromosomal Location of Contig-U04608-1

NO HIT FOUND.

Sequence Contig-U04608-1

GGTGATAGTT CTTTAGATGA TGATATTAAT AATAAAATAA AAGATGAATA
TAACGAATCA ATGGATGATA AAGATGGTGG AGGTGGTGAT AATAATAATA
ATAATAATAA CAATAATAAT AATAATAATA ATAATAATAA CACAGAGAAA
TCAGCATTAG ATTATTCAAG ATTTCCTACT TTTAAACAAG ATATACAGAC
ATTGAGAGAT ATATTTGGAA CATCATATGG CGAATATGAA CTTAAAGGTT
TTTATATGGT ATGTGGTGGT AATTTAGAGG TTGTAATTGA TCAATTAGTA
AACGAACAAA AACAAAAAGA TATGGCATCC TCTCAAAAAC ATAATCATCA
TAGTAATAAT AATAATAATA ATATTAATAT TAATAATAAT AATAGTAATG
GATCACGTCA ATCTTTAACA TCTAGACTAT CAGAAGAGGA TAAAAGACAA
CTTCAACTAC AACTCATCGA AGAACAAGAG AAATTGGAGA AAAAATTCTC
TGATAAAAAG AAACAAGAGA TTAATAATCA TCCATCAAAA AAGAATTTTT
CACAACAAGA AATCGTTAAT GAACTAAAGG ATCTCTTTAG TAAACATGTC
GAAGAGGGTG TAATTGAATG GGTGGCTTAT TCCTGTGAAT ATGATTTGGG
TAAAGCAACA ACTCAATTAG TCGATTTAAA ACATAATAAT TTATTAAAAA
AGAATAACGC ATTAAATAAT AATAATAATA ATAATAGTAG TAGTAATAAC
AATAATAATA ATAATAATAA TAATGGTTTA ATGTCTTTAG ATCCTTCAAC
AATTCAAGGT ATTGAAAGTA ATTTAAATTC ACTTTCAAAA GGTTTACTGG
TTGGTGGTTC TCAATTAACT ATTCCAACTG ATTTAATATC TCAAGTATCA
TTCGATACCT TAACTGAACA AGTTGGTAAA TTAAATGCAA CAAATGATAG
TAGTAGTTTT AATAATAGCA ACAAAAATAA TAATAATAAT AATACAACAA
CAACTACTAC TACAACTACA GCTACTGAAA CTAATAGCCA ATCATCTTCA
ACCACTCCAG TATTCCATCA AAACTTTACT TATGATAAAA AATAATAATT
TTTATCAAAA TAAAAAAAAA AAAAAAAAAA AAAAGAAAAT AAATAAAATA
AAATAAAAAA AAAAAATATT ATTGTAAGAA AAAAAAAAAA AAAAAAAAAA
AAAAA

Translated Amino Acid Sequence Contig-U04608-1

GDSSLDDDINNKIKDEYNESMDDKDGGGGDNNNNNNNNNNNNNNNNNTEKSALDYSRFPT
FKQDIQTLRDIFGTSYGEYELKGFYMVCGGNLEVVIDQLVNEQKQKDMASSQKHNHHSNN
NNNNININNNNSNGSRQSLTSRLSEEDKRQLQLQLIEEQEKLEKKFSDKKKQEINNHPSK
KNFSQQEIVNELKDLFSKHVEEGVIEWVAYSCEYDLGKATTQLVDLKHNNLLKKNNALNN
NNNNNSSSNNNNNNNNNNGLMSLDPSTIQGIESNLNSLSKGLLVGGSQLTIPTDLISQVS
FDTLTEQVGKLNATNDSSSFNNSNKNNNNNNTTTTTTTTTATETNSQSSSTTPVFHQNFT
YDKK**flsk*kkkkkkkenk*nkikkkniivrkkkkkkkk

Homology Contig-U04608-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U04608-1 (Contig-U04608-1Q) /CSM_Contig/Conti...   553  e-157
Contig-U12497-1 (Contig-U12497-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U11064-1 (Contig-U11064-1Q) /CSM_Contig/Conti...    50  6e-06
Contig-U13001-1 (Contig-U13001-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U08277-1 (Contig-U08277-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U04460-1 (Contig-U04460-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U11652-1 (Contig-U11652-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14255-1 (Contig-U14255-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13325-1 (Contig-U13325-1Q) /CSM_Contig/Conti...    42  0.001

Homology Contig-U04608-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU266408) Dictyostelium discoideum vegetative cDNA clone:VS...   442   0.0    3
(AU266407) Dictyostelium discoideum vegetative cDNA clone:VS...   422   0.0    3
(C90563) Dictyostelium discoideum slug cDNA, clone SSI728.        301   0.0    3
(AU073915) Dictyostelium discoideum slug cDNA, clone SSI728.      377   e-100  1
(AU071545) Dictyostelium discoideum slug cDNA, clone SSB768.      371   4e-98  1
(AU261396) Dictyostelium discoideum vegetative cDNA clone:VS...   131   7e-26  1
(CR628338) Legionella pneumophila str. Paris plasmid pLPP, c...    36   0.029  4
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    34   0.074  7
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   0.095  11
(CA997519) rg18e01.y1 Meloidogyne hapla J2 pAMP1 v1 Meloidog...    40   0.16   2

Homology Contig-U04608-1 vs Protein