<Clone: Contig-U04529-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U04529-1
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Assembled
Chromosomal Location of Contig-U04529-1
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more Chromosomal info
>
| Chromosome Number |
5 |
| Length |
5062330 |
| Start Poin |
3,878,755 |
| End Point |
3,878,290 |
| Strand |
MINUS |
Sequence Contig-U04529-1
CCCCACTGCG TTTATTCTTT TTAATTTTAA TTTTTTTTTT TTTTTTTTTG
ATAAAAATTT GTATATACTA TAATAACAGT CATAAAAAAT TACAATAAAA
AAAAAAAATA GTAATAATAA TAAAAAAGAA ATAAAACATT AAAAATGCAA
GGAAGTTTAT TAGGATCATT ATTAATTAAT GGTGGTAAAA AATTCAGTAC
ACCAGTCACA CCATTCAAAC AAAATAACTG TATTATTCCA TCACAACCAT
TATTTAAACA AGCAACACAA CAACAACAAA TNTTACCATC AACTGAAAAT
GAAAATAAAA TGGAAATTCC AACTGAAGAA GGTGAAATGG AATTAACAGC
TGTNCCAAAA AAGAGAGTCA GTTTTACAAG AAATAGAAAG AGAAACTNTT
CAAAGAAACA CGAAAATNTT CACAACATTA CCATTTGTCA AAAATGTAGT
ACACCAAAAT TAANACATAA CCTTTGCTNT GTTTGTTTAA NAAANAATTC
AGTTTAAATT AATTTTAAAA AANTAAAAAA AATTTAAAAA AAAAAAAAGG
GG
Translated Amino Acid Sequence Contig-U04529-1
<All Frames>
phcvysf*f*ffffff**kfvytiitviknynkkkk*****KRNKTLKMQGSLLGSLLIN
GGKKFSTPVTPFKQNNCIIPSQPLFKQATQQQQXLPSTENENKMEIPTEEGEMELTAVPK
KRVSFTRNRKRNXSKKHENXHNITICQKCSTPKLXHNLCXVCLXXNSV*infkkxkki*k
kkkg
Homology Contig-U04529-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U04529-1 (Contig-U04529-1Q) /CSM_Contig/Conti... 636 0.0
Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U10979-1 (Contig-U10979-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U12580-1 (Contig-U12580-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U10772-1 (Contig-U10772-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U09266-1 (Contig-U09266-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U02984-1 (Contig-U02984-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U14573-1 (Contig-U14573-1Q) /CSM_Contig/Conti... 34 0.15
Contig-U14547-1 (Contig-U14547-1Q) /CSM_Contig/Conti... 34 0.15
Contig-U13453-1 (Contig-U13453-1Q) /CSM_Contig/Conti... 34 0.15
Homology Contig-U04529-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AU267149) Dictyostelium discoideum vegetative cDNA clone:VS... 668 0.0 2
(AU267701) Dictyostelium discoideum vegetative cDNA clone:VS... 632 e-180 2
(AU071366) Dictyostelium discoideum slug cDNA, clone SSB319. 184 1e-53 3
(AC010084) Homo sapiens BAC clone RP11-145J12 from Y, comple... 44 0.002 5
(AC107086) Rattus norvegicus clone CH230-200B21, *** SEQUENC... 42 0.045 4
(AL133328) Human DNA sequence from clone RP13-21D1 on chromo... 44 0.098 3
(AC194645) Pan troglodytes BAC clone CH251-501H10 from chrom... 44 0.14 3
(BV782230) pRRL2:Newb:20080411:154745 USMARC Pig Breed SNP D... 48 0.36 1
(EU162611) Capsella rubella clone contig46 BAC sequence. 44 0.37 2
(EE665543) 30123_re457 R. filosa cDNA library Reticulomyxa f... 34 1.0 2
Homology Contig-U04529-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
AE017343_101(AE017343|pid:none) Cryptococcus neoformans var. neo... 44 0.002
CP001577_79(CP001577|pid:none) Micromonas sp. RCC299 chromosome ... 43 0.005
(O94379) RecName: Full=Probable 60S ribosomal protein L32, mitoc... 42 0.014
DQ214849_1(DQ214849|pid:none) Taeniopygia guttata clone 0058P004... 42 0.014
DQ214848_1(DQ214848|pid:none) Taeniopygia guttata clone 0058P001... 41 0.018
CU466930_246(CU466930|pid:none) Candidatus Cloacamonas acidamino... 41 0.024
BC157296_1(BC157296|pid:none) Xenopus tropicalis mitochondrial r... 40 0.041
BC152712_1(BC152712|pid:none) Xenopus laevis hypothetical protei... 39 0.070
BC122245_1(BC122245|pid:none) Danio rerio zgc:153328, mRNA (cDNA... 39 0.12
(B2A2M3) RecName: Full=50S ribosomal protein L32; &CP001034_133... 38 0.16
<Clone: Contig-U04529-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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