Dictyostelium discoideum cDNA Contig-U04438-1

Assembled

Chromosomal Location of Contig-U04438-1

Sequence Contig-U04438-1

GTTTATTTAA TAAATAAGAT ATTTCTTTTT ATGCATTCAA CACTAATATC
ATAGTGCTCA AAATCAAAAC CAATAAAACT TAAATAAATA TAATTTTAAA
AAATAAAATA AAATAAATAA AAAAAATAAT CATCACGATA CCCTTTTATA
ATATTACGTA AAATTTTCAC ATATAAAATT ACAAATCTTT AAAAATAAAA
AATAAAACAA ATTAAACAAA AATGCCTTTA TTTGAAACAA TTAAACATAC
ATACAAACAT TTATGGTCAG ATGCATCAAC ANCAAGNGTT AGAAAATATC
CATCACCAGA AAGACCAGAT ATATTGAGTA TAGATATTTT ATCAAAAGAG
ATAGATCCAA CAACAGGAGT ATTAAAATGT ACAAAATTAA TTATATGTAA
AGGTAATACA CCATCATGGC TAAAATCGAT TTTAGGATCA GGTGAATGTT
TATTCTACGA AGAGACAACA GTAGATCCAA AGAATAAAAT TATGACATTA
AAGACAAAGA ATTTAAATTT CACAAATATA TTAGGTGTCG ATGAAGTTTG
CACCTATGAA CAACATCCAG ACAATGAGGA ATGGACTCTC TTTACTCAAG
AGGCAACCGT AACCTCATC

Translated Amino Acid Sequence Contig-U04438-1

lfnk*disfyafntniivlkiktnkt*iniilknkik*ikkiiitipfynit*nfhi*ny
kslkiknktn*TKMPLFETIKHTYKHLWSDASTXXVRKYPSPERPDILSIDILSKEIDPT
TGVLKCTKLIICKGNTPSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVD
EVCTYEQHPDNEEWTLFTQEATVTS

Homology Contig-U04438-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U04438-1 (Contig-U04438-1Q) /CSM_Contig/Conti...   775  0.0
Contig-U11737-1 (Contig-U11737-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U12543-1 (Contig-U12543-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U11519-1 (Contig-U11519-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U14831-1 (Contig-U14831-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U14139-1 (Contig-U14139-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U13057-1 (Contig-U13057-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U11867-1 (Contig-U11867-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti...    34  0.17

Homology Contig-U04438-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU076350) Dictyostelium discoideum slug cDNA, clone SSA631.      694   0.0    3
(DU530153) 1098609946313 CHORI-243 Ovis aries genomic clone ...    50   0.10   1
(DU329437) 1098486029965 CHORI-243 Ovis aries genomic clone ...    50   0.10   1
(CZ452435) MCF733n08TF Human MCF7 breast cancer cell line li...    44   0.98   2
(AK111750) Oryza sativa Japonica Group cDNA clone:J023052C02...    46   1.6    1
(AC189672) Trichinella spiralis BAC clone TS195-18H12 from c...    46   1.6    1
(AC158052) Bos taurus clone CH240-60E7, *** SEQUENCING IN PR...    46   1.6    1
(AC137285) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    46   1.6    1
(AC095482) Rattus norvegicus clone CH230-7K21, WORKING DRAFT...    46   1.6    1
(AC232190) Tupaia belangeri clone CH275-554H5, WORKING DRAFT...    46   1.6    1

Homology Contig-U04438-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54G07) RecName: Full=Protein slowmo homolog;                        271   1e-71
(Q6TMK8) RecName: Full=Protein slowmo homolog 2; AltName: Full=B...   102   7e-21
(Q9Y3B1) RecName: Full=Protein slowmo homolog 2;  &AK002157_1(AK...   101   1e-20
AF151865_1(AF151865|pid:none) Homo sapiens CGI-107 protein mRNA,...   101   1e-20
(A5GFX0) RecName: Full=Protein slowmo homolog 2;  &CR956646_1(CR...    99   7e-20
AK150668_1(AK150668|pid:none) Mus musculus bone marrow macrophag...    99   1e-19
BC044087_1(BC044087|pid:none) Xenopus laevis similar to chromoso...    97   3e-19
CR382130_757(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    97   3e-19
AJ851573_1(AJ851573|pid:none) Gallus gallus mRNA for hypothetica...    97   5e-19
AJ720406_1(AJ720406|pid:none) Gallus gallus partial mRNA for hyp...    97   5e-19