<Clone: Contig-U03777-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U03777-1
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Assembled
Chromosomal Location of Contig-U03777-1
<
more Chromosomal info
>
| Chromosome Number |
1 |
| Length |
4919822 |
| Start Poin |
1,653,565 |
| End Point |
1,652,912 |
| Strand |
MINUS |
Sequence Contig-U03777-1
AAATAAAAAA TAAATAATAA ATAAAACCAA ATAAATAATA TATAAATAAA
AAAATGGAGA ATCAATTATT TCAATTAAAA TTTACATCAA AACAATTAGA
AAAACAATCA AAGAAATCAG AACAAAGTGA AAAAGCACAA AAGATAAAAT
TAAAGAAAGC AATAGAACAA GGTAATATGG ATGGCGCTAG AATATATGCA
CAAAATGCAA TTCGTGAAAA GAATCAAAGT TTAAATTATT TACGTTTAGC
TTCAAGAATT GATGCAGTTG CAAGTAGAGT TGAAACTGCA ATTCGTATGA
AATCAGTTAC AGGTTCAATG GCAAACATTG TTAAATCAAT GGAGAAATCA
ATGAGAAATA TGGATTTAGA AAAGATTACC CAAGTTATGG ATCAATTCGA
AAGACAATTC GAAGATTTAG ATGTACAATC AGTTTATGTA GAGAATGCAA
TGAATCAAAC TACTACACTT TCAACTCCAG CCGATCAAGT AGACCTTTTA
ATTTCACAAG TTGCCGATGA ACATGGTTTA AATGTTGGTA TGCAAATGGG
TTCAGCACCT TCCGAAAAAG TACAACAAGG TGAAACCGAT GAATTAACCG
AAAGATTAAA TAGATTAAAA CAAAAAAATT AATTTTATTT CAATAAATAA
AAA
Translated Amino Acid Sequence Contig-U03777-1
<All Frames>
iknk**ikpnk*YINKKMENQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMD
GARIYAQNAIREKNQSLNYLRLASRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNM
DLEKITQVMDQFERQFEDLDVQSVYVENAMNQTTTLSTPADQVDLLISQVADEHGLNVGM
QMGSAPSEKVQQGETDELTERLNRLKQKN*fyfnk*k
Homology Contig-U03777-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U03777-1 (Contig-U03777-1Q) /CSM_Contig/Conti... 957 0.0
Contig-U13296-1 (Contig-U13296-1Q) /CSM_Contig/Conti... 34 0.18
Contig-U10806-1 (Contig-U10806-1Q) /CSM_Contig/Conti... 34 0.18
Contig-U05930-1 (Contig-U05930-1Q) /CSM_Contig/Conti... 34 0.18
Contig-U14735-1 (Contig-U14735-1Q) /CSM_Contig/Conti... 32 0.71
Contig-U14515-1 (Contig-U14515-1Q) /CSM_Contig/Conti... 32 0.71
Contig-U12918-1 (Contig-U12918-1Q) /CSM_Contig/Conti... 32 0.71
Contig-U12702-1 (Contig-U12702-1Q) /CSM_Contig/Conti... 32 0.71
Contig-U12682-1 (Contig-U12682-1Q) /CSM_Contig/Conti... 32 0.71
Homology Contig-U03777-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AY484465) Dictyostelium discoideum kinesin family member 12... 892 0.0 2
(AF081802) Dictyostelium discoideum developmental protein DG... 892 0.0 2
(C25550) Dictyostelium discoideum slug cDNA, clone SLA257. 892 0.0 2
(AU265716) Dictyostelium discoideum vegetative cDNA clone:VS... 779 0.0 1
(AU037406) Dictyostelium discoideum slug cDNA, clone SSD596. 117 5e-31 2
(CB284867) DF1684 Dermatophagoides farinae cDNA library Derm... 64 3e-11 2
(EL577848) Physarum00786 Physarum polycephalum starvation st... 66 2e-06 1
(CB284164) DF0887 Dermatophagoides farinae cDNA library Derm... 64 8e-06 1
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ... 48 3e-05 2
(EL741937) LV0233070 Taenia solium UNAM-cd2_larva Taenia sol... 46 3e-05 2
Homology Contig-U03777-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(O96552) RecName: Full=Charged multivesicular body protein 1; Al... 312 6e-84
DQ311345_1(DQ311345|pid:none) Bombyx mori chromatin modifying pr... 186 5e-46
AE017341_438(AE017341|pid:none) Cryptococcus neoformans var. neo... 181 1e-44
(Q5ZKX1) RecName: Full=Charged multivesicular body protein 1b; A... 177 2e-43
AK014091_1(AK014091|pid:none) Mus musculus 13 days embryo head c... 175 1e-42
(Q7LBR1) RecName: Full=Charged multivesicular body protein 1b; A... 174 2e-42
(Q99LU0) RecName: Full=Charged multivesicular body protein 1b-1;... 174 2e-42
AF281064_1(AF281064|pid:none) Homo sapiens CHMP1.5 mRNA, complet... 174 2e-42
BC168175_1(BC168175|pid:none) Rattus norvegicus chromatin modify... 174 2e-42
AE014296_3224(AE014296|pid:none) Drosophila melanogaster chromos... 173 5e-42
<Clone: Contig-U03777-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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