Dictyostelium discoideum cDNA Contig-U03751-1

Assembled

Chromosomal Location of Contig-U03751-1

Sequence Contig-U03751-1

CAAAAATTAA AACAAAAAGA AAAAACAAAA TGATATCAAT AAAAGGAGTG
GTGTCACCAT TATTATTATT TAAAAATAGT AATAACAATT TTAATTTTAC
AAAAATTGTT AATAATTTAA ATAGATATTA CTCAACCACA ACCACAACAA
CCACAACAAC CATCGGAAAT AAAGAAAATA ATGGAAAGAA ATCAATTAAA
ATTTATAAAT CAACAACTAA TAATGCATTA TTTAATATTG CAACAGAAGA
TTGGTTATTT AAAGAATTTG ATTTAAATAA ACAAACATTA TATTTATGGA
GAAATTCACC AACAGTTGTT ATTGGTAGAT ATCAAAATCC ATATAAAGAA
TGTCATCTTC AAAGAATGGA AGAGGATAAT GTTGTATTAG CAAGAAGATA
TAGTGGTGGT GGGTGCTGTT TATCATGATT TAGGTAACAC TAATTTCACA
TTTTTATCAC CAACTGCTGA TTATAGTAAA GATAGAAATN CAAATATCAT
AATTAATTCC CTATCGTCAA TTGGTATTTC AGGACCAATT GAAGCATCTG
GTAGAAATGA TATCATTGTT CAAGGTAAAA AAGTATCAGG TTCAGCTTAT
AAACAATCTG GTCCTCGTTC ATTTCATCAT GGTACAATTA TGATCAATGT
AAATTTAGAT TCACTTCAAA AATATTTAAA TCCAAATAAA GATAAATTAA
AGAGTAAAGG TATTACAAGT GTCATATCAA GAGTATTAAA TATGAAAACT
ATATTACCAA CAATGAATCA TGAAATGGTT TGTGATAGTG TAATTAAAGA
ATTTTGTAAA ATGTATGGAA ATGATAATGT AGAGGTAGAG GAATTGACAG
TTTCAGATTT AGAGAGAATA CCATCATTAA AGGAAACTTA TGAAACCCTT
CAAAAATGGG ACTGGAGATA TGGTAATTCA CCAGAATTTG AACATCAATT
TGAAAAAAGA TTCGATTGGG GCACAGTTGA TATCAATATG AATGTTACAA
AAAGTATAAT TGATAAAGTA AAGATTTATA GTGACTCACT TAATCCAACA
ATGATTGAAG TACTCTCAAA TAATCTTTTA GGTATGAAAT ACAATGAAGA
AGGTATCTCA ATTGCAATTG AAAGAACAAA AACTGTTTTA AATAATATTT
TAGATTCAAA TTCACAATTA GATCAATTAA AAGAAATTTA TAATTCAATT
AACAAATAAA A

Translated Amino Acid Sequence Contig-U03751-1

qklkqkektk*yq*kewchhyyylkivitililqkllii*iditqpqpqqpqqpseikki
mernqlkfinqqlimhylilqqkigylknli*inkhyiygeihqqlllvdikihiknvif
kewkrimly*QEDIVVVGAVYHDLGNTNFTFLSPTADYSKDRNXNIIINSLSSIGISGPI
EASGRNDIIVQGKKVSGSAYKQSGPRSFHHGTIMINVNLDSLQKYLNPNKDKLKSKGITS
VISRVLNMKTILPTMNHEMVCDSVIKEFCKMYGNDNVEVEELTVSDLERIPSLKETYETL
QKWDWRYGNSPEFEHQFEKRFDWGTVDINMNVTKSIIDKVKIYSDSLNPTMIEVLSNNLL
GMKYNEEGISIAIERTKTVLNNILDSNSQLDQLKEIYNSINK*

Homology Contig-U03751-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U03751-1 (Contig-U03751-1Q) /CSM_Contig/Conti...  2151  0.0
Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti...    56  9e-08
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti...    54  4e-07
Contig-U04133-1 (Contig-U04133-1Q) /CSM_Contig/Conti...    54  4e-07
Contig-U13138-1 (Contig-U13138-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U11246-1 (Contig-U11246-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U02042-1 (Contig-U02042-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U00447-1 (Contig-U00447-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U14746-1 (Contig-U14746-1Q) /CSM_Contig/Conti...    50  6e-06

Homology Contig-U03751-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ401506) Dictyostelium discoideum cDNA clone:dds23c15, 3' ...  1485   0.0    1
(BJ390726) Dictyostelium discoideum cDNA clone:dds23c15, 5' ...   791   0.0    2
(BM900949) rc43d01.y1 Meloidogyne hapla egg pAMP1 v1 Meloido...    72   8e-11  2
(BM952114) rc55d11.y1 Meloidogyne hapla egg pAMP1 v1 Meloido...    72   1e-10  2
(FV536145) Modified Microbial Nucleic Acid.                        42   3e-05  14
(FV536144) Modified Microbial Nucleic Acid.                        42   3e-05  14
(FV536055) Modified Microbial Nucleic Acid.                        38   4e-05  14
(FV536054) Modified Microbial Nucleic Acid.                        38   4e-05  14
(FN665652) Clostridium difficile complete genome, strain CF5.      38   1e-04  18
(FV536229) Modified Microbial Nucleic Acid.                        36   1e-04  14

Homology Contig-U03751-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q1QEC2) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   205   1e-72
CP000749_3981(CP000749|pid:none) Marinomonas sp. MWYL1, complete...   201   2e-69
(A8A8B4) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   195   4e-67
(A7ZVS8) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   194   7e-67
(B5FTD0) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   194   1e-66
CU928162_5104(CU928162|pid:none) Escherichia coli ED1a chromosom...   194   1e-66
CP000857_4556(CP000857|pid:none) Salmonella enterica subsp. ente...   193   2e-66
(B7NW66) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   191   2e-66
A98297(A98297) probable lipoate-protein ligase A [imported] - Es...   192   2e-66
(B1XFJ6) RecName: Full=Lipoate-protein ligase A;          EC=2.7...   192   2e-66