Homology Contig-U03115-1 vs Protein

Query= Contig-U03115-1 (Contig-U03115-1Q) /CSM_Contig/Contig-U03115-1Q.Seq.d
         (1397 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL844509_580(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    41   0.12
AE014187_645(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.28
(P20795) RecName: Full=Vacuolar protein sorting-associated prote...    39   0.35
CP000813_2255(CP000813|pid:none) Bacillus pumilus SAFR-032, comp...    39   0.59
AE001362_47(AE001362|pid:none) Plasmodium falciparum 3D7 chromos...    38   0.77
AE014298_2867(AE014298|pid:none) Drosophila melanogaster chromos...    37   1.3
AL844508_260(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    37   1.3
AC117267_6(AC117267|pid:none) Dictyostelium discoideum chromosom...    37   1.3
D21203_1(D21203|pid:none) Drosophila melanogaster forked mRNA fo...    37   1.7
(Q54B64) RecName: Full=Putative uncharacterized protein DDB_G029...    37   2.2
AE014187_132(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.2
AL844509_284(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    36   2.9
AE014185_240(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    36   2.9
(Q54R58) RecName: Full=Probable tyrosine-protein kinase DDB_G028...    36   2.9
(Q54RR9) RecName: Full=Probable serine/threonine-protein kinase ...    36   2.9
(Q9NGQ2) RecName: Full=Kinesin-related protein 1; AltName: Full=...    35   5.0
AL844507_19(AL844507|pid:none) Plasmodium falciparum 3D7 chromos...    35   5.0
AF063866_217(AF063866|pid:none) Melanoplus sanguinipes entomopox...    35   6.5
AL844509_267(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   6.5
AE014186_458(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    35   6.5
AC115684_8(AC115684|pid:none) Dictyostelium discoideum chromosom...    35   6.5
CP001056_3157(CP001056|pid:none) Clostridium botulinum B str. Ek...    35   8.5
AL844509_211(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   8.5
(A6UV02) RecName: Full=UPF0095 protein Maeo_0741;  &CP000743_731...    35   8.5

>AL844509_580(AL844509|pid:none) Plasmodium falciparum 3D7
           chromosome 13.
          Length = 2025

 Score = 40.8 bits (94), Expect = 0.12
 Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
 Frame = +1

Query: 613 KWEGNNGKNFTVYQIEVTS--DNNIFQMVFYISGAPINVGDVKLSAEQSKVDVSIIGYYN 786
           ++   N KN  +Y+ E T+  DNNI     YI+       D  +S + +  +VS     N
Sbjct: 523 EYTNKNPKNCLLYKNEETNYNDNNIKD---YINSMNFKKNDFNISTDMNNTNVS-----N 574

Query: 787 ESINVKSNGCQFDSKNIKNLNCASTGPSNNNPSRLAIT-SFFATKSKNIEL--------- 936
            SIN   NGC  +  NI   N  +T     N      T S +    KNI +
Sbjct: 575 NSINEMKNGCLINDNNIGTNNILNTNNIVRNEKEENYTNSKYYNHFKNINVLPNHIHDQH 634

Query: 937 -DIDRDEHNKKDSNIEIKNEE 996
             + +DE N  D N+ I N E
Sbjct: 635 KILMKDEKNISD-NLNINNSE 654

 Score = 37.7 bits (86), Expect = 1.0
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 17/157 (10%)
 Frame = +1

Query: 748  QSKVDVSIIGYYNESINVKSNGCQFDSKNIKNLNCASTGPSNNNPSRLAITSFFATKSKN 927
            +S  D+++    NE  N  S   +  +K  KN+N      +NNN +   I +
Sbjct: 337  ESNQDITLETSSNEKGNNSSKKNKKKNKKKKNINKKGNSNNNNNENNENIDN-------- 388

Query: 928  IELDIDRDEHNKKDSNIEIKNEEINAGF--------------SW-VTQASVTN--DKGDS 1056
               +ID +E+   ++N ++ NE  N+G                W   Q ++TN  +  +S
Sbjct: 389  -NENIDNNENIDSNNNNQLINENKNSGAIINNDDNNNNNNNNKWKENQNNITNHPNSVNS 447

Query: 1057 TDVKVISNTTEYSKFNDFGALMIKQCFGNGFFQSKFL 1167
            +  K+ SN    +       +  + C  N +F S FL
Sbjct: 448  SSTKICSNIYSVNDIGQSNLISERYCTNNKYFNSTFL 484

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,697,879,239
Number of extensions: 29973126
Number of successful extensions: 75089
Number of sequences better than 10.0: 24
Number of HSP's gapped: 74803
Number of HSP's successfully gapped: 26
Length of query: 465
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 333
Effective length of database: 623,955,076
Effective search space: 207777040308
Effective search space used: 207777040308
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)