Dictyostelium discoideum cDNA Contig-U03115-1

Assembled

Chromosomal Location of Contig-U03115-1

Sequence Contig-U03115-1

ATCAATTTTA TTTACCTATT CATTTATATT TATATTTTAT TTTATAAAAA
ATTAAAAAAG TTACAACAAA CAAAAAAAAA AAAAAAAAAT GAAAATTTTA
ATTTGTTTAA TTCTTCTTTT ATTCACCACT TATTCTGTGT ATGGAAAACA
TTGGGATAAA ATTAAATCAG CTACTGAAGA AGATGATGTT TTCCGTTCCT
ATAAAATAAG AACCAATGAT AAATCAGGAT GTCCTTCATT CTCAGCCAAT
GGAGTTTCAG TTGATAAAAG TATTGTTAAA GACCTTAAAG TTGACACCAG
TATTTTTAAT TTCCAAACAT GTAATAGAAA AGCTACACAA TTCCCAAACT
ACTTTTTCAA TTTCTTTTCA TTAGAACTCA ATGGTAATAA TACCAATAAT
CCAACAAATA GTAGTGCTAG TTCGGATGAA GAATCGTCTG ATGACCATCA
TGATATTGAA TTTTCAAAAA TTTCAATAGG ATATATGCCA ACTTTTATTA
TTGAATATGC TGAAAATAAT AGTATTGAAG GTTTTCAATA TGGTGGTGAT
GAAATTTTGG GTTACATAAA TTTATCAAAA CAAAAATATT CATTAACTAG
AGATCAAAAA AGAAATGGGA AGGAAATAAT GGTAAAAATT TTACTGTCTA
TCAAATTGAA GTTACTTCTG ATAATAATAT TTTCCAAATG GTATTTTACA
TTAGTGGAGC ACCAATCAAT GTTGGTGATG TTAAATTATC AGCTGAACAA
TCAAAAGTTG ATGTTTCAAT CATTGGTTAT TACAATGAAT CAATTAATGT
AAAAAGTAAT GGATGTCAAT TTGATTCCAA AAATATTAAA AATTTAAATT
GTGCTTCCAC TGGTCCTTCA AATAATAATC CATCAAGATT AGCAATAACT
TCATTTTTTG CAACTAAAAG TAAAAACATT GAACTTGATA TTGATAGAGA
TGAACATAAT AAAAAAGATT CAAATATTGA AATAAAAAAT GAAGAAATTA
ATGCTGGTTT TTCATGGGTA ACTCAAGCTT CAGTTACAAA TGATAAAGGT
GACTCAACTG ATGTTAAAGT AATTTCAAAC ACAACTGAAT ATTCAAAATT
CAATGATTTC GGTGCATTAA TGATTAAACA ATGTTTTGGA AATGGTTTCT
TCCAATCAAA GTTTTTAATT CATTCATTTG ATGCAATTCG TCCAAATAAT
TTAACTCATG ATCCAGTACT TGGTGGTGAA TCATCTTTAG ACTCTAGTTC
TTCAAATTCA TCATCTTCAA AATTGGTTTT ATCATTATTT GTTACTTTAT
CCTTAATTTT ATCATTAATA ATTTAAATTT ATTTTTTTAA ATTCAATTTT
TTTCTTTTCA ATAAAAATTT ATTAACTTTT AATTTATCAT TAATATT

Translated Amino Acid Sequence Contig-U03115-1

silftysfififyfikn*KSYNKQKKKKKMKILICLILLLFTTYSVYGKHWDKIKSATEE
DDVFRSYKIRTNDKSGCPSFSANGVSVDKSIVKDLKVDTSIFNFQTCNRKATQFPNYFFN
FFSLELNGNNTNNPTNSSASSDEESSDDHHDIEFSKISIGYMPTFIIEYAENNSIEGFQY
GGDEILGYINLSKQKYSLTRDQKRNGKEIMVKILLSIKLKLLLIIIFSKWYFTLVEHQSM
LVMLNYQLNNQKLMFQSLVITMNQLM*kvmdvnlipkilki*ivlplvlqiiihqd*q*l
hflqlkvktlnliliemniikkiqilk*kmkklmlvfhg*lklqlqmikvtqlmlk*fqt
qlniqnsmisvh**lnnvlemvssnqsf*fihlmqfvqii*lmiqylvvnhl*tlvlqih
hlqnwfyhylllyp*fyh**fkfiflnsifffsikiy*lliyh*y

Homology Contig-U03115-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U03115-1 (Contig-U03115-1Q) /CSM_Contig/Conti...  2351  0.0
Contig-U04312-1 (Contig-U04312-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U10091-1 (Contig-U10091-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09112-1 (Contig-U09112-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13873-1 (Contig-U13873-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11166-1 (Contig-U11166-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U06310-1 (Contig-U06310-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12491-1 (Contig-U12491-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U12462-1 (Contig-U12462-1Q) /CSM_Contig/Conti...    32  1.5

Homology Contig-U03115-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU060900) Dictyostelium discoideum slug cDNA, clone SLC138.     1033   0.0    2
(BJ373855) Dictyostelium discoideum cDNA clone:ddc5g01, 3' e...   507   0.0    2
(AU037671) Dictyostelium discoideum slug cDNA, clone SSE158.      531   0.0    2
(AU034171) Dictyostelium discoideum slug cDNA, clone SLC138.      531   0.0    3
(C92925) Dictyostelium discoideum slug cDNA, clone SSF768.        670   0.0    1
(C94098) Dictyostelium discoideum slug cDNA, clone SSG406.        442   e-119  1
(AF474335) Dictyostelium discoideum ABC transporter ABCC.3 (...   165   e-110  5
(AU073038) Dictyostelium discoideum slug cDNA, clone SSF768.      305   3e-78  1
(AU072313) Dictyostelium discoideum slug cDNA, clone SSE158.      299   2e-76  1
(AU060859) Dictyostelium discoideum slug cDNA, clone SLB765.       34   2e-04  5

Homology Contig-U03115-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AL844509_580(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    41   0.12
AE014187_645(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.28
(P20795) RecName: Full=Vacuolar protein sorting-associated prote...    39   0.35
CP000813_2255(CP000813|pid:none) Bacillus pumilus SAFR-032, comp...    39   0.59
AE001362_47(AE001362|pid:none) Plasmodium falciparum 3D7 chromos...    38   0.77
AE014298_2867(AE014298|pid:none) Drosophila melanogaster chromos...    37   1.3
AL844508_260(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    37   1.3
AC117267_6(AC117267|pid:none) Dictyostelium discoideum chromosom...    37   1.3
D21203_1(D21203|pid:none) Drosophila melanogaster forked mRNA fo...    37   1.7
(Q54B64) RecName: Full=Putative uncharacterized protein DDB_G029...    37   2.2