<Clone: Contig-U03053-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U03053-1

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Assembled

Chromosomal Location of Contig-U03053-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 4,522,749
End Point 4,522,413
Strand MINUS

Sequence Contig-U03053-1

ACAGTTTCAA CAAATGCAGC ATCAAATGCA GCAGCAGCAA CAACAACAAA
TGCAACAGCA ACAGCAACAA CAACAACAAC AACAACCACA ACAAATGCAA
ATTCAATTAT CAACACATGA AGAAAGATTA GAATTAGCAT CACAATCATC
ACCATTTGAA GAGAAAGTAA CATTAAATGG TTTACAAAAG AATATTAAAG
TGGTTATAAA GAATAGTCCA TTCAATGTTC AATTAAGATT AAAGAAAGCA
AATGAAATCG ATTTGAATTG TGTTGCATTT GAATCGACAT TACTCTATGA
TTGTGATACC AATGAAGAGA AGGAAGTAGA TTTCGT

Translated Amino Acid Sequence Contig-U03053-1

<All Frames> 
QFQQMQHQMQQQQQQQMQQQQQQQQQQQPQQMQIQLSTHEERLELASQSSPFEEKVTLNG
LQKNIKVVIKNSPFNVQLRLKKANEIDLNCVAFESTLLYDCDTNEEKEVDF


Homology Contig-U03053-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U03053-1 (Contig-U03053-1Q) /CSM_Contig/Conti...   480  e-136
Contig-U11140-1 (Contig-U11140-1Q) /CSM_Contig/Conti...    40  0.001
Contig-U09487-1 (Contig-U09487-1Q) /CSM_Contig/Conti...    38  0.006
Contig-U13111-1 (Contig-U13111-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U12133-1 (Contig-U12133-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U11617-1 (Contig-U11617-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U10782-1 (Contig-U10782-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U12630-1 (Contig-U12630-1Q) /CSM_Contig/Conti...    34  0.091
Contig-U12593-1 (Contig-U12593-1Q) /CSM_Contig/Conti...    32  0.36
Contig-U11102-1 (Contig-U11102-1Q) /CSM_Contig/Conti...    32  0.36


Homology Contig-U03053-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ329142) Dictyostelium discoideum cDNA clone:dda30n20, 5' ...   480   e-131  1
(AC224569) Bos taurus clone CH240-482A4, WORKING DRAFT SEQUE...    34   1.3    4
(AC138442) Rattus norvegicus strain Brown Norway clone RP31-...    44   2.4    2
(BB196120) Mus musculus adult male spinal cord cDNA, RIKEN f...    32   2.7    2
(BB490171) Mus musculus 13 days embryo stomach cDNA, RIKEN f...    32   2.7    2
(AC124918) Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos...    44   3.5    2
(AL512639) Human DNA sequence from clone RP11-346G21 on chro...    40   3.7    3
(BC082677) Xenopus laevis hypothetical LOC494686, mRNA (cDNA...    44   3.8    1
(AC141815) Apis mellifera clone CH224-61C4, WORKING DRAFT SE...    44   3.8    1
(AC141814) Apis mellifera clone CH224-61C3, WORKING DRAFT SE...    44   3.8    1


Homology Contig-U03053-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


DQ407612_1(DQ407612|pid:none) Physarum polycephalum cudA-like pr...    75   6e-13
(O00841) RecName: Full=Putative transcriptional regulator cudA;        47   3e-04
L39933_2(L39933|pid:none) Entamoeba histolytica pyridine nucleot...    34   1.8
FN357325_6(FN357325|pid:none) Schistosoma mansoni genome sequenc...    33   2.4
(P10079) RecName: Full=Fibropellin-1; AltName: Full=Fibropellin-...    33   4.1
L08692_2(L08692|pid:none) Strongylocentrotus purpuratus fibropel...    33   4.1
(P49013) RecName: Full=Fibropellin-3; AltName: Full=Fibropellin ...    32   5.4
L33862_1(L33862|pid:none) Sea urchin fibropellin III mRNA, 3' end.     32   7.0
DQ407617_1(DQ407617|pid:none) Hartmannella vermiformis cudA-like...    32   7.0


<Clone: Contig-U03053-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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