Dictyostelium discoideum cDNA Contig-U03036-1

Assembled

Chromosomal Location of Contig-U03036-1

Sequence Contig-U03036-1

AGGTACAGAA GAAATATTTA ATAAAGCATT GTTATCAGTT ATTTATTTCT
CAAAAGGTAA AAGTAAAAAA TCAATCGTAT CAATTCAAAG AGCTATGGAT
TTAATAAATT CAGATAAACC AGCATATGGA ACAGAAATAA GTTTATCACT
AATTTTAATG GCTCGTGTTT TACTTTTTAT TTTAAATGAT GAATTCTTTA
AAAATCTATA TAACGATAAT CCAACATCAT CATCATCATC ATCATCGTCA
TCATCAACAG CAGCAACAAC AACAATACCA ACAGTTAATA GTCAATTTGA
TTTAATGGGA TTTGATGATA ATTTCATAAA TTTAAAGGAA TCAATTATAA
ATGATGCTTC TGATATTTCT GAAATCAATG AATTGATTAA AAAAAAAGAA
CAACAACAAC CACCACCTCA ACAACCACCA CCACCACCAT CTTCTCCATA
AATAATAATT CTAAATTTAA GAGTTTTAAA GATTCAACAG GACGTGATCA
TAAAACTGTT GAAGTTTGGT TAAGAACAAT GTTAACTTGT TTAAAGGGTG
GTCCAGATTT TTGTTATCCA TCTTATTTAC GTCTATATGG TCTCTACATT
TTATTTTTAA ATAGAATTAC TTATTTCTGT AAAAAGTATA AGAAAACTAT
GATCTCTGCA GTTTCATTCA GTGGTGGTAG TGGTAGAAGT AATAGTGGTA
GTAGTAGAAA GAAAATCAAG TTTTAATGAA AGTCTTTCTG CAAGTCAAGC
CTCTGATTTA TCAAGTAATA GTAGTGTTTC AACAAACTCT AATGAATTAC
AATCATTCAA AAAGAAAGCT TTGATTTTAT TATATAAAAG TGTTAAAGAA
TCAAAAGCAA GACAATTACA ATTGGAAGAA GCATTATGTT GGGCTGAAAT
CATCAAAATT GAAGAAAATC CTGATAAATT ATCAATAGCA AATTCAACTG
CAAATGATCT TTATCAAAAA TTAAATATTC AACCTTGGTT TTAAAAAATA
AATAAAAAAT AAAAATATAA TTAAATAATA AAAAAAAAAA AA

Translated Amino Acid Sequence Contig-U03036-1

GTEEIFNKALLSVIYFSKGKSKKSIVSIQRAMDLINSDKPAYGTEISLSLILMARVLLFI
LNDEFFKNLYNDNPTSSSSSSSSSSTAATTTIPTVNSQFDLMGFDDNFINLKESIINDAS
DISEINELIKKKEQQQPPPQQPPPPPSSP*iiilnlrvlkiqqdviikllkfg*eqc*lv
*rvvqifvihliyvymvstfyf*iellisvksirkl*slqfhsvvvvvevivvvverkss
fneslsasqasdlssnssvstnsnelqsfkkkalillyksvkeskarqlqleealcwaei
ikieenpdklsianstandlyqklniqpwf*kinkk*kyn*iikkkk

Homology Contig-U03036-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U03036-1 (Contig-U03036-1Q) /CSM_Contig/Conti...  1094  0.0
Contig-U05383-1 (Contig-U05383-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U12561-1 (Contig-U12561-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U11949-1 (Contig-U11949-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U11873-1 (Contig-U11873-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14782-1 (Contig-U14782-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12512-1 (Contig-U12512-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11279-1 (Contig-U11279-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U10682-1 (Contig-U10682-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13198-1 (Contig-U13198-1Q) /CSM_Contig/Conti...    36  0.074

Homology Contig-U03036-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C90601) Dictyostelium discoideum slug cDNA, clone SSI833.        559   0.0    2
(BJ346387) Dictyostelium discoideum cDNA clone:dda30c19, 3' ...   519   0.0    3
(AU073951) Dictyostelium discoideum slug cDNA, clone SSI833.      444   e-120  1
(CR848744) Zebrafish DNA sequence from clone DKEY-165G20 in ...    62   5e-05  1
(AC176543) Strongylocentrotus purpuratus clone R3-3075O19, W...    46   1e-04  6
(FJ423037) Salmo salar clone BAC 39E15, *** SEQUENCING IN PR...    60   2e-04  1
(FJ423035) Salmo salar clone BAC 152K21, *** SEQUENCING IN P...    60   2e-04  1
(AC237429) Monodelphis domestica clone VMRC6-531O2, WORKING ...    60   2e-04  1
(CR392003) Zebrafish DNA sequence from clone DKEY-242N9 in l...    58   8e-04  1
(BX649211) Zebrafish DNA sequence from clone DKEY-215O18 in ...    58   8e-04  1

Homology Contig-U03036-1 vs Protein