Dictyostelium discoideum cDNA Contig-U02712-1

Assembled

Chromosomal Location of Contig-U02712-1

Sequence Contig-U02712-1

GATGAAATTG TTAATTATTC TTTTATTATT TATATTTTTA AATAAATCCA
ATTCAGATAT TATTAATAAT CAAAATCAAA ATCAAAAACA AAAACAACAA
CAACAACAAC AACAACAACA ACAACAACAA CAAAAAATAA AAAATGGATA
TAAATTATCA AATGGTTTAG CATTAACACC ACCAATGGGA TTTAATTATT
GGAATTTTGA TGGTTGTAAA ACTAATTTAA TTAATGAAAC AATGATGATG
GATACTGCAT ATGCAATGTC AACAAATGGT ATGTCAAAAG TTGGATATGA
ATATGTAAAT TTAGATGATT GTTGGATGGC AAAAACTAGA GATGAGAATG
GTAATTTAAG AGCTGACCCA ATTAGATTCC CACATGGTAT AAAGTATTTA
TCAGATTATA TTCATTCATT AGGATTGAAA TTTGGAATTT ATGGTGACAT
TGGTAGTGAA ACTTGTCAAG GCTATCCTGG AAGTGAGAAT TATTTAGAAC
AAGATGCGAA ACAATTTGCA GAATGGGGTG TTGATTTTGT GAAAATGGAT
GGCTGCAATA TGCAAGTGTC AGATATGAAA AAGGCATACA CAGATCTGGG
ACAGTATTTA CAAAACACAG GCAGACCCAT GGTGTATAGT TGTAGTTGGC
CCACGTATGC ATATGTGCAG AATTATAACA ATGCCATTCG ACTACATTGA
AGGGATTTGC AACCTTTGGA GAGAGTTTCA AGACATTACT GATAATTTCA
CCGAGTGGAC GCAGATACTG GACGAAATGG AGGATTCCGT TCCCAAGAGA
TCTCAATTCG CAGCACCTGG CTCATTTAAC GATCCTGATA TGTTGGAGAT
TGGCAATGGG TTGGAGAATG CAGTTGAATA TAAAAGCATG TTTTCATTAT
GGTCAATTAT AGCAGCACCC TTAATAGCAG GTAATGATAT AATATCAATG
AGTAAAGAAG CATTGGAGAT TTTAATCAAT GAGGAGGTAA TTCAAGTTAA
CCCAAGATCC ATTAGGAATT CAAGGTAATC GTGTATATAA AAATCAAAAG
TTAGAAGTTT TTTATCAAAG AACTTTGATT AATAATTCTT ATGCAATTGC
TTTATTTAAT AGAGGTGATA CTAATTCTGA TATTAGCATC ACAAGTGAGA
TGTTAAATTT AACAAATCAT CAAAATTATA ACATTCGTGA TCTTTGGTCT
CATACTGATA ATGGTACATT CTCTGATACA TTCACTGCTT CAGNTCAACC
ACATGGTACT GTTTTAATTA AATTATCCCC NAAAATTAAT AATAATAATA
ATAATAATAA TAATAATAAT AATAATAATA ATAATAATAA TAATAATAAT
AATAATAATT CAATTCATTT ACCATTAAAA TATAAAAAAT ATTTTTTAAA
TAAATAAAAT AAATAAATAA ATGATTT

Translated Amino Acid Sequence Contig-U02712-1

MKLLIILLLFIFLNKSNSDIINNQNQNQKQKQQQQQQQQQQQQQKIKNGYKLSNGLALTP
PMGFNYWNFDGCKTNLINETMMMDTAYAMSTNGMSKVGYEYVNLDDCWMAKTRDENGNLR
ADPIRFPHGIKYLSDYIHSLGLKFGIYGDIGSETCQGYPGSENYLEQDAKQFAEWGVDFV
KMDGCNMQVSDMKKAYTDLGQYLQNTGRPMVYSCSWPTYAYVQNYNNAIRLH*rdlqple
rvsrhy**fhrvdadtgrnggfrsqeisirstwli*rs*yvgdwqwvgecs*i*khvfim
vnysstlnsr**ynine*rsigdfnq*ggnss*pkih*efkvivyikiks*kffikel*l
iilmqllylievilililasqvrc*i*qiikiitfvifglilimvhslihsllqxnhmvl
f*lnypxkliiiiiiiiiiiiiiiiiiiiiiiiqfiyh*niknif*inkink*mi

Homology Contig-U02712-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U02712-1 (Contig-U02712-1Q) /CSM_Contig/Conti...  2252  0.0
Contig-U12098-1 (Contig-U12098-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U14904-1 (Contig-U14904-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U14525-1 (Contig-U14525-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13041-1 (Contig-U13041-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11465-1 (Contig-U11465-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U07986-1 (Contig-U07986-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12505-1 (Contig-U12505-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U12363-1 (Contig-U12363-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U06454-1 (Contig-U06454-1Q) /CSM_Contig/Conti...    38  0.026

Homology Contig-U02712-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU061833) Dictyostelium discoideum slug cDNA, clone SLG273.     1110   0.0    1
(C93290) Dictyostelium discoideum slug cDNA, clone SSM530.        436   0.0    3
(BJ343492) Dictyostelium discoideum cDNA clone:dda16c07, 3' ...   391   0.0    3
(AU074940) Dictyostelium discoideum slug cDNA, clone SSM530.      476   e-129  1
(GR580118) CBZY2565.b1 CBZY Dictyostelium purpureum 18 hr st...    84   6e-49  5
(GR580119) CBZY2565.g1 CBZY Dictyostelium purpureum 18 hr st...    70   5e-22  5
(EE262430) D04_D04fm1b8_pDNRf_520550 Myzus persicae, line F0...    46   1e-11  5
(E38060) Novel alpha-galactosidase gene.                           64   9e-11  4
(E38059) Novel alpha-galactosidase gene.                           64   2e-10  4
(AB025362) Clostridium josui agaA gene for alpha-galactosida...    64   2e-09  4

Homology Contig-U02712-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001348_1205(CP001348|pid:none) Clostridium cellulolyticum H10,...   172   4e-77
AB025362_1(AB025362|pid:none) Clostridium josui agaA gene for al...   174   3e-75
BT077336_1(BT077336|pid:none) Lepeophtheirus salmonis Pacific fo...   196   1e-74
BA000030_1480(BA000030|pid:none) Streptomyces avermitilis MA-468...   179   9e-74
CP001348_1561(CP001348|pid:none) Clostridium cellulolyticum H10,...   168   2e-73
AL939104_273(AL939104|pid:none) Streptomyces coelicolor A3(2) co...   174   2e-73
CP000360_1673(CP000360|pid:none) Acidobacteria bacterium Ellin34...   158   1e-72
CP000927_2119(CP000927|pid:none) Caulobacter sp. K31, complete g...   169   4e-70
(P14749) RecName: Full=Alpha-galactosidase;          EC=3.2.1.22...   171   5e-70
A12675_1(A12675|pid:none) guar alpha galactosidase cDNA.              171   5e-70