Homology Contig-U02712-1 vs DNA
Query= Contig-U02712-1 (Contig-U02712-1Q) /CSM_Contig/Contig-U02712-1Q.Seq.d
(1427 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU061833) Dictyostelium discoideum slug cDNA, clone SLG273. 1110 0.0 1
(C93290) Dictyostelium discoideum slug cDNA, clone SSM530. 436 0.0 3
(BJ343492) Dictyostelium discoideum cDNA clone:dda16c07, 3' ... 391 0.0 3
(AU074940) Dictyostelium discoideum slug cDNA, clone SSM530. 476 e-129 1
(GR580118) CBZY2565.b1 CBZY Dictyostelium purpureum 18 hr st... 84 6e-49 5
(GR580119) CBZY2565.g1 CBZY Dictyostelium purpureum 18 hr st... 70 5e-22 5
(EE262430) D04_D04fm1b8_pDNRf_520550 Myzus persicae, line F0... 46 1e-11 5
(E38060) Novel alpha-galactosidase gene. 64 9e-11 4
(E38059) Novel alpha-galactosidase gene. 64 2e-10 4
(AB025362) Clostridium josui agaA gene for alpha-galactosida... 64 2e-09 4
(CP001348) Clostridium cellulolyticum H10, complete genome. 66 5e-06 1
(EX645396) 256676827 Pea aphid whole body normalized full le... 46 1e-04 3
(FF307202) 279368476 Pea aphid whole body normalized full le... 46 1e-04 3
(BT102844) Picea glauca clone GQ0201_I17 mRNA sequence. 46 1e-04 3
(EF676204) Picea sitchensis clone WS02719_G07 unknown mRNA. 46 1e-04 3
(FN621320) Bombus terrestris EST, 5' end sequence, clone bom... 44 4e-04 4
(BY895674) Cryptomeria japonica cDNA clone: CMFL049_N08, 5'e... 58 0.001 1
(BY890391) Cryptomeria japonica cDNA clone: CMFL035_F01, 5'e... 58 0.001 1
(BY889250) Cryptomeria japonica cDNA clone: CMFL032_C10, 5'e... 58 0.001 1
(BY882194) Cryptomeria japonica cDNA clone: CMFL012_N15, 5'e... 58 0.001 1
(BI507303) BB170032B20B04.5 Bee Brain Normalized/Subtracted ... 44 0.001 2
(BY890609) Cryptomeria japonica cDNA clone: CMFL035_P05, 5'e... 56 0.004 1
(EX352216) GQ03111.B7_G10 GQ031 - Xylem Scrapings (Normalize... 38 0.005 3
(FN695517) Pinus pinaster EST, clone WZ0APPAD5YP21FM1. 40 0.006 2
(EX442321) GQ04105.B7_E17 GQ041 - Shoot tip - Dormant (Norma... 46 0.007 2
(EX352104) GQ03111.B7_B15 GQ031 - Xylem Scrapings (Normalize... 38 0.007 3
(DV985149) GQ0202.B3_E17 GQ020: Clean ROOTS systems -Diurnal... 46 0.007 2
(DV989990) GQ0223.B7_A22 GQ022: ROOT XYLEM - mature trees Pi... 46 0.007 2
(GE480901) GQ0201.B3.r_I17 GQ020: Clean ROOTS systems -Diurn... 46 0.008 2
(FN623729) Bombus terrestris EST, 5' end sequence, clone bom... 44 0.016 3
(DT632758) EST1147689 Normalized pine embryo library, Lib_D ... 54 0.018 1
(DR687768) EST1077850 Normalized pine embryo library, Lib_D ... 54 0.018 1
(CF390626) RTDR2_20_E02.g1_A021 Loblolly pine roots recoveri... 54 0.018 1
(BX255141) Pinus pinaster xylem EST, clone PP111G01. 54 0.018 1
(GW765238) PBA0214.C21_C01 Pba02-Xylem-wounded-Norm (PBA02) ... 54 0.018 1
(GT239835) PCO0139.C21_E09 Pco01-Bark-Wounded-Norm (PCO01) P... 54 0.018 1
(FE523757) mat2920444 Radiata pine transition earlywood cDNA... 54 0.018 1
(AW587600) ST60D05 Pine TriplEx shoot tip library Pinus taed... 54 0.018 1
(EX625429) 255433276 Pea aphid whole body normalized full le... 46 0.023 2
(FN617287) Bombus terrestris EST, 5' end sequence, clone bom... 44 0.031 3
(GO536195) Mdfrfu3509O16.g1 Apple_EST_Mdfrfu Malus x domesti... 38 0.042 3
(BT107198) Picea glauca clone GQ03104_C23 mRNA sequence. 52 0.070 1
(EX347058) GQ03104.B7_C23 GQ031 - Xylem Scrapings (Normalize... 52 0.070 1
(EX346995) GQ03104.B7_A03 GQ031 - Xylem Scrapings (Normalize... 52 0.070 1
(EX345746) GQ03103.B7_H02 GQ031 - Xylem Scrapings (Normalize... 52 0.070 1
(EX345654) GQ03103.B7_D04 GQ031 - Xylem Scrapings (Normalize... 52 0.070 1
(EX345380) GQ03103.B7.1_H02 GQ031 - Xylem Scrapings (Normali... 52 0.070 1
(EX345288) GQ03103.B7.1_D04 GQ031 - Xylem Scrapings (Normali... 52 0.070 1
(EC825477) SME00006196 esmbsro2 Sawyeria marylandensis cDNA,... 40 0.090 2
(EL571773) Physarum05367 Physarum polycephalum starvation st... 44 0.095 2
(GO525944) Mdwdb7506B09.g1 Apple_EST_Mdwdb Malus x domestica... 34 0.17 3
(BT115441) Picea glauca clone GQ03616_M04 mRNA sequence. 46 0.17 2
(DY640234) PU2_plate6_C18 PU2 Prunus persica cDNA similar to... 50 0.28 1
(AU084463) Cryptomeria japonica mRNA, clone:CC1386, 5' end, ... 50 0.28 1
(AU084318) Cryptomeria japonica mRNA, clone:CC1213, 5' end, ... 50 0.28 1
(BY892712) Cryptomeria japonica cDNA clone: CMFL041_J18, 5'e... 50 0.28 1
(BY891932) Cryptomeria japonica cDNA clone: CMFL039_I04, 5'e... 50 0.28 1
(BY886651) Cryptomeria japonica cDNA clone: CMFL025_A05, 5'e... 50 0.28 1
(GE572858) CCHT6582.b1_K13.ab1 CCHT Niger Seed Guizotia abys... 50 0.28 1
(GE566357) CCHT24130.b1_D10.ab1 CCHT Niger Seed Guizotia aby... 50 0.28 1
(GE523140) CCHS10335.b1_N16.ab1 CCHS Espina Barnadesia spino... 50 0.28 1
(EK275220) 1095462273965 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.38 2
(CD450539) USDA-FP_102502 Adult Alate Brown Citrus Aphid Tox... 42 0.59 2
(FK028319) RM_G_01476 hemocytes of freshwater pearl mussel c... 34 0.80 2
(EL414693) CHCL3372.b1_H04.ab1 CHC(LMS) Texas blueweed Helia... 34 0.99 3
(EL421908) CHCM1466.b1_D08.ab1 CHC(LMS) Texas blueweed Helia... 34 1.0 3
(FN624225) Bombus terrestris EST, 5' end sequence, clone bom... 44 1.0 2
(BT124460) Picea sitchensis clone WS0474_F18 unknown mRNA. 48 1.1 1
(AC012099) Homo sapiens chromosome 14 clone RP11-45G3 contai... 48 1.1 1
(AC106855) Homo sapiens chromosome 18 clone RP11-51G16 map 1... 48 1.1 1
(CU466289) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.1 1
(AC015612) Homo sapiens clone RP11-45G3, LOW-PASS SEQUENCE S... 48 1.1 1
(EJ110776) 1092343153760 Global-Ocean-Sampling_GS-27-01-01-1... 48 1.1 1
(EE192668) CC-L01_013_C11 Coffea young leaves Coffea canepho... 48 1.1 1
(DV700011) CGN-45945 Seed of Late Development Stage Coffea c... 48 1.1 1
(DV699990) CGN-45920 Seed of Late Development Stage Coffea c... 48 1.1 1
(DV694122) CGN-38505 Seed of Late Development Stage Coffea c... 48 1.1 1
(BE248715) NF010F06DT1F1048 Drought Medicago truncatula cDNA... 48 1.1 1
(HO315409) CFHA4245.b1 CFHA Panicum virgatum K101 normalized... 48 1.1 1
(HO314197) CFHA3580.b1 CFHA Panicum virgatum K101 normalized... 48 1.1 1
(HO294575) CFCA2330.b1 CFCA Panicum virgatum Sunburst normal... 48 1.1 1
(GH290475) WS0474.C21_F18 SS-BD-32 Picea sitchensis cDNA clo... 48 1.1 1
(FL993951) CCHY22797.b1 CCHY Panicum virgatum callus (N) Pan... 48 1.1 1
(EX309138) GQ01310.T3_C07 GQ013 - Elongating ROOTS tips - sa... 48 1.1 1
(AW226482) ST82H02 Pine TriplEx shoot tip library Pinus taed... 48 1.1 1
(EA720440) Sequence 99319 from patent US 7365185. 40 2.6 2
(EA690496) Sequence 69375 from patent US 7365185. 32 2.9 6
(GW403260) C300X28R Fragaria x ananassa var. Chandler red fr... 40 3.0 2
(GW403258) C304G09R Fragaria x ananassa var. Chandler red fr... 40 3.0 2
(DU533316) KMG00339 Paenibacillus polymyxa genomic library P... 44 4.2 2
(BT013622) Lycopersicon esculentum clone 132423F, mRNA seque... 46 4.3 1
(GP491031) Sequence 22028 from patent US 7557201. 46 4.3 1
(ET780801) CHO_OF599xm19f1.ab1 CHO_OF Nicotiana tabacum geno... 46 4.3 1
(EK164875) 1095458046909 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.3 1
(EJ140073) 1092343642998 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.3 1
(EL595898) He_pwd_0181C06_M13R Heliconius erato pooled wing ... 46 4.3 1
(DV997451) GQ02765.B3_A11 GQ099: Mixed spruce tissues Picea ... 46 4.3 1
(DV986528) GQ0201.B3_I17 GQ020: Clean ROOTS systems -Diurnal... 46 4.3 1
(DR552311) WS03222.C21_N15 WS-MC-N-A-20 Picea glauca cDNA cl... 46 4.3 1
(DR525216) WS02719.B21_G07 SS-IL-A-FL-14 Picea sitchensis cD... 46 4.3 1
(DR485208) WS02817.C21_I04 SS-IB-A-FL-13 Picea sitchensis cD... 46 4.3 1
(DR485107) WS02817.C21_C22 SS-IB-A-FL-13 Picea sitchensis cD... 46 4.3 1
(AM983244) Pinus sylvestris EST, clone 7H02. 46 4.3 1
(CU585082) Theobroma cacao, mRNA sequence (KZ0AAB4YC11FM1). 46 4.3 1
(CU548360) Theobroma cacao, mRNA sequence (KZ0AAS2YH14FM1). 46 4.3 1
(CU518346) Theobroma cacao, mRNA sequence (KZ0ABH15YJ16FM1). 46 4.3 1
(CU512195) Theobroma cacao, mRNA sequence (KZ0ACN3YL20FM1). 46 4.3 1
(CU512121) Theobroma cacao, mRNA sequence (KZ0ACN3YH24FM1). 46 4.3 1
(CU510317) Theobroma cacao, mRNA sequence (KZ0ACM3YA19FM1). 46 4.3 1
(CU508651) Theobroma cacao, mRNA sequence (KZ0ACF3YI23FM1). 46 4.3 1
(CU495782) Theobroma cacao, mRNA sequence (KZ0AAD3YH02FM1). 46 4.3 1
(CU495639) Theobroma cacao, mRNA sequence (KZ0AAD1YG18FM1). 46 4.3 1
(CU475565) Theobroma cacao, mRNA sequence (KZ0AAC9YP20FM1). 46 4.3 1
(CU474912) Theobroma cacao, mRNA sequence (KZ0AAC3YG18FM1). 46 4.3 1
(CU474812) Theobroma cacao, mRNA sequence (KZ0AAC2YG18FM1). 46 4.3 1
(CU474129) Theobroma cacao, mRNA sequence (KZ0AAC10YE11FM1). 46 4.3 1
(CO119284) GR__Eb022B18.r GR__Eb Gossypium raimondii cDNA cl... 46 4.3 1
(CO107986) GR__Eb0039I02.r GR__Eb Gossypium raimondii cDNA c... 46 4.3 1
(CO071448) GR__Ea29J12.r GR__Ea Gossypium raimondii cDNA clo... 46 4.3 1
(BQ697915) NXPV_062_D11_F NXPV (Nsf Xylem Planings wood Vert... 46 4.3 1
(BP878058) Solanum lycopersicum cDNA, clone: FA10CF02, 5' en... 46 4.3 1
(BI931657) EST551546 tomato flower, 8 mm to preanthesis buds... 46 4.3 1
(BG319384) NXPV_027_C10_F NXPV (Nsf Xylem Planings wood Vert... 46 4.3 1
(BG318720) NXPV_016_B04_F NXPV (Nsf Xylem Planings wood Vert... 46 4.3 1
(BG317619) NXPV_003_G12_F NXPV (Nsf Xylem Planings wood Vert... 46 4.3 1
(GW772426) PBA0224.C21_D13 Pba02-Xylem-wounded-Norm (PBA02) ... 46 4.3 1
(GW764261) PBA028.C21_G21 Pba02-Xylem-wounded-Norm (PBA02) P... 46 4.3 1
(GW760074) PBA029.C21_P20 Pba02-Xylem-wounded-Norm (PBA02) P... 46 4.3 1
(GO873096) CLS_CLiFpEfSpn_65a3_1_d17cLibkit5LD_B09 CLS_CLiFp... 46 4.3 1
(GO853597) CLS_CLiFpEfSpn_23a3_1_l09cLibkit5LD_F05 CLS_CLiFp... 46 4.3 1
(FS088867) Solanum melongena mRNA, clone: SmFL33C14, 5'end. 46 4.3 1
(FG397106) 000411KSFA003114HT (KSFA) A. deliciosa small frui... 46 4.3 1
(EY385625) CAXA5791.rev CAXA Helobdella robusta Subtracted L... 46 4.3 1
(EX413718) GQ03616.B7_M04 GQ036 - Shoot tip - Active growth ... 46 4.3 1
(ES852075) UFL_680_81 Cotton fiber 0-10 day post anthesis Go... 46 4.3 1
(ES844509) UFL_111_52 Cotton fiber 0-10 day post anthesis Go... 46 4.3 1
(ES803088) UFL_617_28 Cotton fiber 0-10 day post anthesis Go... 46 4.3 1
(FI650671) BD_CBa0026M06.r BD_CBa Brachypodium distachyon ge... 40 4.8 2
(BP189648) Dugesia japonica cDNA, clone: 06728_HH, expressed... 32 4.8 3
(EL422619) CHCM2195.b1_E22.ab1 CHC(LMS) Texas blueweed Helia... 36 5.1 2
(AF465308) Dictyostelium discoideum ABC transporter ABCA.6 (... 40 7.8 3
(AL671090) Mouse DNA sequence from clone RP23-154A10 on chro... 34 7.9 2
(AP001652) Homo sapiens genomic DNA, chromosome 11q, clone:R... 34 8.0 2
(AC090848) Homo sapiens chromosome 11, clone RP11-780O24, co... 34 8.0 2
(AL590087) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 8.0 2
>(AU061833) Dictyostelium discoideum slug cDNA, clone SLG273.
Length = 704
Score = 1110 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus
Query: 145 tggatataaattatcaaatggtttagcattaacaccaccaatgggatttaattattggaa 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tggatataaattatcaaatggtttagcattaacaccaccaatgggatttaattattggaa 204
Query: 205 ttttgatggttgtaaaactaatttaattaatgaaacaatgatgatggatactgcatatgc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttttgatggttgtaaaactaatttaattaatgaaacaatgatgatggatactgcatatgc 264
Query: 265 aatgtcaacaaatggtatgtcaaaagttggatatgaatatgtaaatttagatgattgttg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgtcaacaaatggtatgtcaaaagttggatatgaatatgtaaatttagatgattgttg 324
Query: 325 gatggcaaaaactagagatgagaatggtaatttaagagctgacccaattagattcccaca 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggcaaaaactagagatgagaatggtaatttaagagctgacccaattagattcccaca 384
Query: 385 tggtataaagtatttatcagattatattcattcattaggattgaaatttggaatttatgg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtataaagtatttatcagattatattcattcattaggattgaaatttggaatttatgg 444
Query: 445 tgacattggtagtgaaacttgtcaaggctatcctggaagtgagaattatttagaacaaga 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgacattggtagtgaaacttgtcaaggctatcctggaagtgagaattatttagaacaaga 504
Query: 505 tgcgaaacaatttgcagaatggggtgttgattttgtgaaaatggatggctgcaatatgca 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcgaaacaatttgcagaatggggtgttgattttgtgaaaatggatggctgcaatatgca 564
Query: 565 agtgtcagatatgaaaaaggcatacacagatctgggacagtatttacaaaacacaggcag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtgtcagatatgaaaaaggcatacacagatctgggacagtatttacaaaacacaggcag 624
Query: 625 acccatggtgtatagttgtagttggcccacgtatgcatatgtgcagaattataacaatgc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acccatggtgtatagttgtagttggcccacgtatgcatatgtgcagaattataacaatgc 684
Query: 685 cattcgactacattgaaggg 704
||||||||||||||||||||
Sbjct: 685 cattcgactacattgaaggg 704
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 1,601,595,424
Number of extensions: 94627808
Number of successful extensions: 7535518
Number of sequences better than 10.0: 145
Length of query: 1427
Length of database: 117,728,717,442
Length adjustment: 24
Effective length of query: 1403
Effective length of database: 114,750,809,658
Effective search space: 160995385950174
Effective search space used: 160995385950174
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home