Dictyostelium discoideum cDNA Contig-U02469-1

Assembled

Chromosomal Location of Contig-U02469-1

Sequence Contig-U02469-1

TAAAATATTA TTTTAATTTT TTTTTTTATT TTTTTAATTT ATTTTTATTT
TTATTTATTT TTTTCTTTTT TTTTTTCTTT TTTTTTTTAA AAAACTATAA
ATTAATTTTT TAAATTATTT TTTTTTAATT TTTGTTAGTT AAAAAAACAT
TTAATTAAAT AAAAATCATT ACAACTGTAT TAATAATAAA TAAATAAATA
AATAAACTTT TTTTTTATAT AATTTAGTAA ATAAAAAAAA AATTTATGAC
TTTAAACAAA ATAAATAAAA TTATTTTTAA TTATAATAAA AATAAAANCA
ATTCAAATTA GCGAAAAAAT GATAAAAGGA TCAAGTATGG TTTTAAAAGA
GCTCTCAAGT GGAGCTTTAA GAAGAGGATC AAGGGAATTT ATTTCAAATG
TNCAAAGAAG AAATTCAATT TGNGGNCCAT GTNTTGGACT CGATTCAAAG
CAATCACTAA CTTCAACATC TAAAATGTTT TCGGATGATT CAATTGGTTC
AATTTTAGAA AATTCGACAA ATATTCAAGA TTTTCAAGAT AGTTTTCAAA
AACCTCAACC ATTTCCAGTA AGAAATAATT CAATTTCTGG AATTATAAAT
TCAATAAAGA ATGAAAAAAT AAAAAATTTA AATCCATTAA CTTTTCAAAA
TAATGGAATT GTAAATAATG GAATGTACGA TATGAATAGA AGATTCTCAA
TTGACCCTCT TTCAATGAGT TCAAAAAGAG AGACTAATAA TAATAATAAT
TTATTTCCAA ATGGAAATTT AGGAAAATTT AAATCTTTTA ATCTTGATGA
AAGTTTTATT GAATTAGAAG CAGAATCAAC ATTTAATAAT GTTTGGGGTG
AATTAGTAAC AAAATATGGA TTAGAGAATT TAGAATTCCC AAAAGAGATA
ACATTTTTAG CAGGAGCACC TGGATCAGGT AAAGGTACGA ATACAGAAGT
TTTAATGAAT GCATTAGGAG TTAATGAAGA ACCAATTGTG ATGAGCTCAT
TATTGAATTC ACCAGAATGT ATTGAAATAA AGAAACAAGG TGGATTGGTT
AATGATAAAG TTGTATTAGA ACTTTTATTG GCACAATTTA GGTTACCCCG
ATTATTTATG TGAAAATCCA AGGTCCAAAG AAAGGTGTTA TCATCGATGG
TTTCCCACGT TCTGCCAAAC AAGTTAAATT TGTAGAATTA CTCTTTGATA
AACTTAGTTA AAATTAGAAA AACAATTAAT CCAAACGCTT CTTTACCACG
TTTTAGCAAT TAGTGTTTTA CATGTAAGTG CAGAGAGAAT CTGTAAAGGG
GACAATTATC CCGTGGAGAA ATATGCCCTT AAAGGGACTC AATTAGAGGG
GTTCAAACAC TTCCCACTTT TGGGGATTAG AGATCCCGAT ATCGCCCCAA
ATGCCTCTAA AAAACGTTAT ACCTTGTATC AAGAACAATT CAATCATTTA
AAATCTTTAG AAGATAAATT CGATTTTGAT TTAATTGATG CAAATGGTAC
TTTAAAAGAT GTACAAAATA CAATTAAAAC CTCTTATGCT AAATTACAAC
CACACCTTTA AAAAAAAAAA AAAAAAAAAA AAAAATAAAT TATATACACA
TTAAAATTTT TTACCGATAA AAAAAAAAAA A

Translated Amino Acid Sequence Contig-U02469-1

*niilifffifliyfyfylffsfffsfff*ktin*ffklfffnfc*lkkhlik*kslqly
***ink*infffi*fsk*kknl*l*tk*IKLFLIIIKIKXIQISEKMIKGSSMVLKELSS
GALRRGSREFISNVQRRNSIXGPCXGLDSKQSLTSTSKMFSDDSIGSILENSTNIQDFQD
SFQKPQPFPVRNNSISGIINSIKNEKIKNLNPLTFQNNGIVNNGMYDMNRRFSIDPLSMS
SKRETNNNNNLFPNGNLGKFKSFNLDESFIELEAESTFNNVWGELVTKYGLENLEFPKEI
TFLAGAPGSGKGTNTEVLMNALGVNEEPIVMSSLLNSPECIEIKKQGGLVNDKVVLELLL
AQFRLPRLFM*kskvqrkvlssmvshvlpnklnl*nyslinlvkirktinpnaslprfsn
*cftckcrenl*rgqlsrgeicp*rdsirgvqtlptfgd*rsryrpkcl*ktlylvsrti
qsfkifrr*irf*fn*ckwyfkrctkyn*nllc*itttplkkkkkkkkinyihikifyr*
kkk

Homology Contig-U02469-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U02469-1 (Contig-U02469-1Q) /CSM_Contig/Conti...  1850  0.0
Contig-U10149-1 (Contig-U10149-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U06465-1 (Contig-U06465-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U12147-1 (Contig-U12147-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12085-1 (Contig-U12085-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U05805-1 (Contig-U05805-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13992-1 (Contig-U13992-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U13704-1 (Contig-U13704-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U13224-1 (Contig-U13224-1Q) /CSM_Contig/Conti...    36  0.12

Homology Contig-U02469-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU060190) Dictyostelium discoideum slug cDNA, clone SLA542.      357   0.0    7
(BJ324142) Dictyostelium discoideum cDNA clone:dda5c02, 5' e...   460   0.0    3
(BJ341049) Dictyostelium discoideum cDNA clone:dda5c02, 3' e...   438   0.0    7
(C90820) Dictyostelium discoideum slug cDNA, clone SSJ185.        648   0.0    4
(AU038049) Dictyostelium discoideum slug cDNA, clone SSH203.      359   0.0    4
(BJ324967) Dictyostelium discoideum cDNA clone:dda8n19, 5' e...   531   e-159  2
(BJ341960) Dictyostelium discoideum cDNA clone:dda8n19, 3' e...    92   4e-45  5
(GR582138) CBZZ1952.b1 CBZZ Dictyostelium purpureum 18 hr st...    94   1e-33  3
(GR582139) CBZZ1952.g1 CBZZ Dictyostelium purpureum 18 hr st...    92   6e-29  3
(FN357326) Schistosoma mansoni genome sequence supercontig S...    40   0.045  2

Homology Contig-U02469-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115606_12(AC115606|pid:none) Dictyostelium discoideum chromoso...   444   e-123
CP001032_1634(CP001032|pid:none) Opitutus terrae PB90-1, complet...    91   3e-20
BX294134_237(BX294134|pid:none) Rhodopirellula baltica SH 1 comp...    92   7e-17
GN096235_1(GN096235|pid:none) Sequence 1016 from Patent WO200903...    38   0.004
AF445193_1(AF445193|pid:none) Homo sapiens unknown mRNA.               39   0.008
BC036666_1(BC036666|pid:none) Homo sapiens adenylate kinase 5, m...    39   0.008
AY171600_1(AY171600|pid:none) Homo sapiens adenylate kinase 6 mR...    39   0.008
BC012467_1(BC012467|pid:none) Homo sapiens adenylate kinase 5, m...    39   0.008
BC154083_1(BC154083|pid:none) Xenopus tropicalis hypothetical pr...    35   0.017
CP001184_493(CP001184|pid:none) Ureaplasma urealyticum serovar 1...    44   0.017