<Clone: Contig-U02230-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U02230-1

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Assembled

Chromosomal Location of Contig-U02230-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 5,987,531
End Point 5,988,439
Strand PLUS

Sequence Contig-U02230-1

CATTAAATTA AATAATAATA AATTTCTCTC TCTAAATCTA TAAAATGGAA
CAAAAAACCG CCCCAACTCA ATATGAAGTA AAAGTACAAT ATAATAATTC
AATTTTAAAT TATGCCATTG ATCACAGTGA CCAACTTACT GATATCCAAA
AAGAATTAAT TCAATTTACC AAAGAAAATA TTGAAAGACA TATTATGTTG
ACTCAAAGCT GAACAATGTT CATTCTTTAA ACTTTTAATC CAAGTTTTAA
ATGCAAAGAA AACTATTGAT ATTGGTGTTT TTACAGGTCT TTCATCATTA
ACTGCAGCAT TGGCAATGGG TGACGAAGGT AGAGTTGTTG CATGTGATGT
TTCAACCGAA TATACTCAAC ATGCACTTAA ATTCTGGGCT AAAGCAGGTG
TTGATCATAA AATCAATTTA AAGATTCAAC CAGCTTCAAA AACATTACAA
GAATTAATTG ACCAAGGTGA AGAGAATACT TATGATTTTT GTTTTCATTG
ATGCTGATAA AACTGGATAT GACACTTATT ATGAATTATC ACTTAAATTA
ATTAGAAAAG GGTGGAATCA TTGCCATTGA TAATGTTTTA CAACATGGGT
CCGTGTTGCA GATCCTAATG CCAATGTAGA ACCAAATTTA GTTGCAATTC
GTGCACTCAA TGATAAAATC TTAGCTGATA AACGTGTTAC TAAATCATTA
CTCCCAATTG CTGATGGTAT CACTTTAATT ACTAAAATTA ATTAAATATT
AAAAAAAAAG TGTTTTGAAA AAAAAAAAAA ATAAAAAAAT AATGAATAAA
TTTTGTTTTT TTTTTTTAAA TAAATAAATA AAAAAAAAAA AAAAATTACC
CAGTTGGGAT AAATGATATT TTAATTTTAT TAAAAAAAAA AA--------
--TTAAAANT TAAAAAAAAN GGNTTTNANA AAAAAAAAAA NAAAAAAAAA
AAGGAAAAAA TTTGNTTTTT TTTTTTTAAA TANTTTTTTA AAAAAAAAAA
AAAATT

Translated Amino Acid Sequence Contig-U02230-1

<All Frames> 
h*ik***islsksikwnkkppqlnmk*kyniiiqf*implitvtnlliskkn*fnlpkki
lkdilc*lkaeqcsffklliqvlnakktidigvftglssltaalamgdegrvvacdvste
ytqhalkfwakagvdhkinlkiqpasktlqelidqgeentydfcfh*c**nwi*hll*ii
t*in*krveslplimfynmgpccrs*cqcrtkfscnsctq**nls**tcy*iitpnc*wy
hfny*n*lnikkkvf*kkkkikk**infvfff*ink*KKKKNYPVGINDILILLKKK---

---LKXKKXGFXKKKXKKKKEKIXFFFFKXFFKKKKK


Homology Contig-U02230-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U02230-1 (Contig-U02230-1Q) /CSM_Contig/Conti...  1374  0.0
Contig-U05074-1 (Contig-U05074-1Q) /CSM_Contig/Conti...    50  5e-06
Contig-U14891-1 (Contig-U14891-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U06282-1 (Contig-U06282-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U14076-1 (Contig-U14076-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U12935-1 (Contig-U12935-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U12085-1 (Contig-U12085-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U11943-1 (Contig-U11943-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U10970-1 (Contig-U10970-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U06593-1 (Contig-U06593-1Q) /CSM_Contig/Conti...    40  0.005


Homology Contig-U02230-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU270835) Dictyostelium discoideum vegetative cDNA clone:VS...   815   0.0    5
(AU267636) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    5
(AU263882) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    4
(AU261652) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    5
(AU266351) Dictyostelium discoideum vegetative cDNA clone:VS...   531   0.0    5
(AU261478) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    5
(AU264259) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    4
(AU270834) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    4
(AU267141) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    4
(AU267635) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    3


Homology Contig-U02230-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q86IC9) RecName: Full=Probable caffeoyl-CoA O-methyltransferase...   189   2e-98
CP001291_665(CP001291|pid:none) Cyanothece sp. PCC 7424, complet...   113   1e-35
CP000117_2418(CP000117|pid:none) Anabaena variabilis ATCC 29413,...   106   6e-34
CP001287_3295(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...   110   2e-33
AC116982_73(AC116982|pid:none) Dictyostelium discoideum chromoso...    96   8e-33
CP000806_4680(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...   108   8e-31
CP000473_6366(CP000473|pid:none) Solibacter usitatus Ellin6076, ...   103   2e-30
DQ091255_1(DQ091255|pid:none) Fenneropenaeus chinensis O-methylt...    96   3e-30
CP000155_4134(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    87   1e-29
BT073419_1(BT073419|pid:none) Oncorhynchus mykiss clone omyk-evn...   100   1e-29


<Clone: Contig-U02230-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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