<Clone: Contig-U01961-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U01961-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U01961-1

< more Chromosomal info >

Chromosome Number 6
Length 3595308
Start Poin 3,271,864
End Point 3,272,651
Strand PLUS

Sequence Contig-U01961-1

AAAAAAAAAA AAAAAATGAA AATAATATTA ATATTGTTAT TTATATCTAT
AATCTTAAAT TCAAGTTTTG CAATGTTCAA ATTATCAAAT TTTTATGGAT
TACAAAGAAC TAGTGAAGAT TCATACATAT TAACAAATTT GAATAATCCA
TTGAATGTAA TTCACATTTC CAAAGATTTA TTGGTATCAG TATCTTTTAA
TAGTATTAAA GAGAATATTA ACAATTTAGA GATTTCATCA ACAAATAATC
ATGATTATAA ATTAATTGTA TTTGGAAGTA TGACACAATC AACTCATAAT
TTTAATAATA AATTTAACAT TGTTACAATG TATAAAAAAG AAACCAATAA
TAATGATAAT AATGGATATT TCTATACAAT AGATAATGAT ATTTTATCAC
AAATTGGTAG TATTAATAAA ATTAAAGTTT CAACAATCCA AAACTCTAAT
GGTAAATCAA TTAAATTAGA TAATACTTCA AATTTATTAC TTCAAGGAAA
TTTAGAAGAT AATAAATTAA GTTTAATTAA TATTTACAGT GAATTAAATT
AATTTTAATT TTAATAATAT TGATAATAAA AATAAAAATA ATAAAAATTA
AATAAATAAA TAGATTAAAA GACATT---- ------AANC CTTTNCATTG
GGTTATCCTT CCATTTTTTT TCTTCCGGGG GTTTTTGGGG GTTTTTTTTT
TGGTTTTTTT TTTTTTTNCN GGGGTTTTTT TTTTTTTTTT TTTTTTTTTT
TTTGGTTTTT AAATTTTTTT AATTTTTTTT ATTTATTTGG TTTAGGGGCC
TTTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence Contig-U01961-1

<All Frames> 
kkkknenniniviyiynlkfkfcnvqiikflwitkn**rfihinkfe*siecnshfqrfi
gisif**y*rey*qfrdfink*s*l*inciwkydtins*f***i*hcynv*krnq*****
wiflynr**yfitnw*y**n*sfnnpkl*w*in*ir*yfkfitsrkfrr**ikfn*ylq*
iklililiiliikikiikik*INRLKDI---

---XFXLGYPSIFFLPGVFGGFFFGFFFFXXGFFFFFFFFFWFLNFFNFFYLFGLGAFKK
KKKKKKKKKKKKKKKKKKKKKKKKKK


Homology Contig-U01961-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U01961-1 (Contig-U01961-1Q) /CSM_Contig/Conti...   950  0.0
Contig-U11516-1 (Contig-U11516-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U09894-1 (Contig-U09894-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U05173-1 (Contig-U05173-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14386-1 (Contig-U14386-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U11919-1 (Contig-U11919-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U10605-1 (Contig-U10605-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U10390-1 (Contig-U10390-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U09731-1 (Contig-U09731-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U09153-1 (Contig-U09153-1Q) /CSM_Contig/Conti...    38  0.016


Homology Contig-U01961-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(C93060) Dictyostelium discoideum slug cDNA, clone SSF647.        599   e-167  1
(AU074747) Dictyostelium discoideum slug cDNA, clone SSL747.      476   e-130  1
(AU074744) Dictyostelium discoideum slug cDNA, clone SSL724.      476   e-130  1
(AU072991) Dictyostelium discoideum slug cDNA, clone SSF647.      444   e-120  1
(FV536207) Modified Microbial Nucleic Acid.                        38   1e-05  10
(FV536206) Modified Microbial Nucleic Acid.                        38   1e-05  10
(FV536429) Modified Microbial Nucleic Acid.                        42   2e-05  12
(FV536428) Modified Microbial Nucleic Acid.                        42   2e-05  12
(FV536369) Modified Microbial Nucleic Acid.                        38   4e-05  10
(FV536368) Modified Microbial Nucleic Acid.                        38   4e-05  10


Homology Contig-U01961-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AL844504_88(AL844504|pid:none) Plasmodium falciparum 3D7 chromos...    53   2e-05
(P13824) RecName: Full=Clustered-asparagine-rich protein;       ...    49   2e-04
A23535(A23535;A49245) clustered asparagine-rich merozoite-associ...    49   2e-04
AE014188_472(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    49   3e-04
AC116960_55(AC116960|pid:none) Dictyostelium discoideum chromoso...    48   5e-04
(Q54HS1) RecName: Full=Putative uncharacterized protein DDB_G028...    47   9e-04
AL844505_76(AL844505|pid:none) Plasmodium falciparum 3D7 chromos...    47   0.001
AC115682_3(AC115682|pid:none) Dictyostelium discoideum chromosom...    47   0.001
AF047005_1(AF047005|pid:none) Plasmodium falciparum asparagine-r...    45   0.003
AL031745_73(AL031745|pid:none) Plasmodium falciparum DNA from MA...    45   0.003


<Clone: Contig-U01961-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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