Dictyostelium discoideum cDNA Contig-U01854-1

Assembled

Chromosomal Location of Contig-U01854-1

Sequence Contig-U01854-1

CAATATAAAA ACAAATCGTC CACCATTAAT TTATGGCGAG GATAAAGATA
AGAAATCTTT ATTCCCAGAA CCACAAGATT ATGATGTTGA TGAACCAACC
TACGAAACCT CGTTCTGTGT CAAACTCGGT CCAAATGGTG TATTCCAACA
TGAACTTCGT TTCACCAATG CCAATGCTAG AGAGAATTCC GACATCCAAA
AGGCCATCGA ATTGAGTCTA AAACAAACAG ATGTCGTCAT TGTAAAGAAT
CCAAATGATG ACATTGAAAA CGACTTTGTC GTTTTCAATG AACAACCAGA
TGAAAGAGAA AAGGAATTAG AACATTGGGA ACTTATGGAT GAATGTAGCT
CCTCCTTGGT CAACTTTGTC ACCACTCCTT ACAATTTCTC TGAAATAGAG
TTCCCACGTC TCGCCTCAAC CTGTTCAACT CAAATGCTAA AAAAGAATTT
AAATCAAAAT AATCCTTGGT TAAATTCAAA ATCATTAATT GCAAATATTT
CCCAAAAATA ATTCAATTAA ACATTTGGAA AATATTTTTA TTTTTTTTTA
TTTTCTAATT TTTTTTTTTC TTCTTGAAAA AAAAAAAAAA AAAAAAAAAA
TAAAAAAAAA AAAAAAAATA TTTAATGAGA AAGGGATTTA AAAAATAATA
AAAATAATAA ATATAATAAA TAAATAATTC CAAATCAATA ATAAAAATAA
ATAATAAAAA TAAAAAAAAT AAAAATAATA AAAAAAATAA TAAAAAATAA
TAAAAATAAT AAAAAAAAAA ATAATAAAAA TAAATCAAAT AATAAAAAAA
AAAAAAAATA ATAATAATAA TATTAATAGA AATAACACCA ATAATTACAA
AAATAATACA AATAATAATA TAAAAAAAAT TAAAAAAA-- --------AA
TTTGGGGGGA TGGTTATTTA TAATATTAAT GGGAATATTA TAATTAATTT
GGAATAATTT TAGAAATAAT AATATAAAAA AAATTACCTT TTTTAAAAAA
AAATTTTAAA CTTGTGAATA GAATTTATAG ATATTTAGTA AAGAATTTAA
ATAAATAAAA TGTGTA

Translated Amino Acid Sequence Contig-U01854-1

i*kqivhh*fmarikirnlysqnhkimmlmnqptkprsvsnsvqmvysnmnfvspmpmle
riptskrpsn*v*nkqmssl*riqmmtlkttlsfsmnnqmkekrn*nignlwmnvappws
tlsplltislk*sshvspqpvqlkc*kri*ikiilg*iqnh*lqifpknnsikhlenifi
ffyflifffllekkkkkkkikkkkkifnekgi*kiikiiniink*fqinnknk**k*kk*
k**kk**KIIKIIKKKIIKINQIIKKKKNNNNNINRNNTNNYKNNTNNNIKKIKK---

---FGGMVIYNINGNIIINLE*f*k**ykknylf*kkilnl*iefidi**ri*inkmc

Homology Contig-U01854-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U01854-1 (Contig-U01854-1Q) /CSM_Contig/Conti...  1059  0.0
Contig-U09321-1 (Contig-U09321-1Q) /CSM_Contig/Conti...    78  2e-14
Contig-U13943-1 (Contig-U13943-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11810-1 (Contig-U11810-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U11241-1 (Contig-U11241-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U10387-1 (Contig-U10387-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U10367-1 (Contig-U10367-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U14343-1 (Contig-U14343-1Q) /CSM_Contig/Conti...    36  0.075
Contig-U11838-1 (Contig-U11838-1Q) /CSM_Contig/Conti...    36  0.075
Contig-U10981-1 (Contig-U10981-1Q) /CSM_Contig/Conti...    36  0.075

Homology Contig-U01854-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU074304) Dictyostelium discoideum slug cDNA, clone SSK296.      476   e-129  1
(AU269809) Dictyostelium discoideum vegetative cDNA clone:VS...   371   e-113  2
(C94017) Dictyostelium discoideum slug cDNA, clone SSK707.        276   8e-85  2
(GR571003) CBTG1618.g1 CBTG Dictyostelium purpureum 12 hr ve...   113   3e-43  3
(GR572153) CBTG530.g1 CBTG Dictyostelium purpureum 12 hr veg...   113   3e-43  3
(GR571892) CBTG2269.b1 CBTG Dictyostelium purpureum 12 hr ve...   113   3e-43  3
(GR572732) CBTG936.g1 CBTG Dictyostelium purpureum 12 hr veg...   113   3e-43  3
(GR572622) CBTG862.b1 CBTG Dictyostelium purpureum 12 hr veg...   113   3e-43  3
(GR570236) CBTG1054.b1 CBTG Dictyostelium purpureum 12 hr ve...   113   3e-43  3
(GR587688) CCAB389.g1 CCAB Dictyostelium purpureum 0 hr star...   113   3e-43  3

Homology Contig-U01854-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000083_4421(CP000083|pid:none) Colwellia psychrerythraea 34H, ...    36   2.0
(Q8MT36) RecName: Full=Probable histone-lysine N-methyltransfera...    36   2.6
AB046785_1(AB046785|pid:none) Homo sapiens mRNA for KIAA1565 pro...    36   2.6
EU342371_66(EU342371|pid:none) Welwitschia mirabilis chloroplast...    35   4.5
AE017308_381(AE017308|pid:none) Mycoplasma mobile 163K complete ...    35   4.5
EU956224_1(EU956224|pid:none) Zea mays clone 1559233 hypothetica...    35   4.5