Homology Contig-U01824-1 vs DNA
Query= Contig-U01824-1 (Contig-U01824-1Q) /CSM_Contig/Contig-U01824-1Q.Seq.d
(370 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C90347) Dictyostelium discoideum slug cDNA, clone SSI282. 180 3e-41 1
(AC067836) Homo sapiens chromosome 8, clone RP11-785H20, com... 50 0.068 1
(AC037486) Homo sapiens chromosome 8, clone RP11-398G24, com... 50 0.068 1
(AC009281) Homo sapiens chromosome 15 clone 8_C_22 map 15, *... 50 0.068 1
(EK581242) 1095521701408 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.27 1
(EK563665) 1095521029581 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.27 1
(EK225363) 1095460156842 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.27 1
(GR579539) CBZY2148.b1 CBZY Dictyostelium purpureum 18 hr st... 48 0.27 1
(GR568124) CBTF3643.b1 CBTF Dictyostelium purpureum 12 hr ve... 48 0.27 1
(GR566726) CBTF2538.b1 CBTF Dictyostelium purpureum 12 hr ve... 48 0.27 1
(DU718224) pyk19g02.g1 VT847 Caenorhabditis briggsae genomic... 34 0.80 2
(AC182682) Populus trichocarpa clone Pop1-33J5, complete seq... 38 0.89 3
(AM474214) Vitis vinifera, whole genome shotgun sequence, co... 44 1.6 2
(AC115360) Mus musculus BAC clone RP23-191N22 from chromosom... 34 2.1 2
(AC101774) Mus musculus chromosome 19, clone RP24-113J17, co... 34 2.1 2
(AC158039) Bos taurus clone CH240-64D19, WORKING DRAFT SEQUE... 32 2.1 2
(AL132943) Caenorhabditis elegans YAC Y116F11B. 42 2.3 3
(DN788259) 92981392 Sea Urchin primary mesenchyme cell cDNA ... 34 2.8 2
(AC176790) Strongylocentrotus purpuratus clone R3-3106K14, W... 38 2.8 2
(AC053523) Homo sapiens BAC clone RP11-563J6 from 2, complet... 38 3.3 2
(CR354534) Zebrafish DNA sequence from clone CH211-140C18 in... 44 4.2 1
(AM448126) Vitis vinifera contig VV78X181220.2, whole genome... 44 4.2 1
(AC229914) Oryza minuta clone OM__Ba0079N04, complete sequence. 44 4.2 1
(CQ342195) Sequence 16289 from Patent WO0157275. 44 4.2 1
(CQ329439) Sequence 3533 from Patent WO0157275. 44 4.2 1
(CQ304968) Sequence 16073 from Patent WO0186003. 44 4.2 1
(CQ292425) Sequence 3530 from Patent WO0186003. 44 4.2 1
(CQ267942) Sequence 16203 from Patent WO0157277. 44 4.2 1
(CQ255338) Sequence 3599 from Patent WO0157277. 44 4.2 1
(CQ229802) Sequence 16641 from Patent WO0157273. 44 4.2 1
(CQ216765) Sequence 3604 from Patent WO0157273. 44 4.2 1
(CQ146580) Sequence 16602 from Patent WO0157276. 44 4.2 1
(CQ133534) Sequence 3556 from Patent WO0157276. 44 4.2 1
(CQ107940) Sequence 16799 from Patent WO0157272. 44 4.2 1
(CQ094776) Sequence 3635 from Patent WO0157272. 44 4.2 1
(CQ076944) Sequence 12744 from Patent WO0157278. 44 4.2 1
(CQ067720) Sequence 3520 from Patent WO0157278. 44 4.2 1
(CQ057657) Sequence 8477 from Patent WO0157270. 44 4.2 1
(CQ052649) Sequence 3469 from Patent WO0157270. 44 4.2 1
(FV536023) Modified Microbial Nucleic Acid. 44 4.2 1
(FV536022) Modified Microbial Nucleic Acid. 44 4.2 1
(FN357583) Schistosoma mansoni genome sequence supercontig S... 44 4.2 1
(AP000783) Homo sapiens genomic DNA, chromosome 11q clone:CM... 44 4.2 1
(AL035686) Human DNA sequence from clone RP5-965N20 on chrom... 44 4.2 1
(AC007614) Homo sapiens chromosome 16 clone RP11-491F9, comp... 44 4.2 1
(AC112463) Rattus norvegicus clone CH230-130O2, *** SEQUENCI... 44 4.2 1
(AC103142) Rattus norvegicus clone CH230-40N16, WORKING DRAF... 44 4.2 1
(FP476085) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.2 1
(CU856625) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.2 1
(AC080039) Homo sapiens chromosome 11 clone RP11-398M20 map ... 44 4.2 1
(AC236537) Oryza minuta clone OM__Ba0143N06, *** SEQUENCING ... 44 4.2 1
(AC233711) Homo sapiens chromosome 7 clone ABC12-49061200F22... 44 4.2 1
(AC231854) Oryza minuta clone OM__Ba0205J09, *** SEQUENCING ... 44 4.2 1
(AC215533) Oryza punctata clone OP__Ba0019D11, *** SEQUENCIN... 44 4.2 1
(AC184954) Bos taurus clone CH240-178N6, WORKING DRAFT SEQUE... 44 4.2 1
(AC012311) Homo sapiens chromosome 16 clone CTC-542P17, WORK... 44 4.2 1
(AC009083) Homo sapiens chromosome 16 clone RP11-358G8, WORK... 44 4.2 1
(AQ673336) HS_5480_B1_E12_T7A RPCI-11 Human Male BAC Library... 44 4.2 1
(EK437869) 1095521102420 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.2 1
(EC293264) BRAINF089488H11 POSSUM_01-POSSUM-C-BRAIN-2KB Tric... 44 4.2 1
(GT567549) CM01-S2-003-012-C11-HM.F Worker heads Coptotermes... 44 4.2 1
(EX733569) ZNKAA_4536.abd Gadus morhua pooled kidney samples... 44 4.2 1
(FH348301) CHO_OF4264xb09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 5.1 2
(CP002027) Synthetic Mycoplasma mycoides JCVI-syn1.0 clone s... 36 5.6 5
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 5.7 5
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 5.7 5
(AC183277) Bos taurus clone CH240-98J5, WORKING DRAFT SEQUEN... 38 6.6 3
(FV536345) Modified Microbial Nucleic Acid. 30 6.8 2
(FV536344) Modified Microbial Nucleic Acid. 30 6.8 2
(AP006379) Lotus japonicus genomic DNA, chromosome 1, clone:... 32 8.1 2
(CP001465) Borrelia spielmanii A14S plasmid A14S_lp28-8, com... 30 8.8 2
(CP001442) Borrelia valaisiana VS116 plasmid VS116_lp28-8, c... 30 8.9 2
(AY341247) Homo sapiens integral membrane protein 2B (ITM2B)... 36 9.7 2
>(C90347) Dictyostelium discoideum slug cDNA, clone SSI282.
Length = 182
Score = 180 bits (91), Expect = 3e-41
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 280 gatggcaaatataaaatttcagaaaaattaactgaccatttaataaataatcaagatgaa 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gatggcaaatataaaatttcagaaaaattaactgaccatttaataaataatcaagatgaa 150
Query: 340 gaaaatattaaaatttgggttacttttaatt 370
|||||||||||||||||||||||||||||||
Sbjct: 151 gaaaatattaaaatttgggttacttttaatt 181
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 237,420,030
Number of extensions: 18311417
Number of successful extensions: 1744170
Number of sequences better than 10.0: 73
Length of query: 370
Length of database: 117,728,717,442
Length adjustment: 23
Effective length of query: 347
Effective length of database: 114,874,889,149
Effective search space: 39861586534703
Effective search space used: 39861586534703
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home