<Clone: Contig-U01283-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U01283-1

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Assembled

Chromosomal Location of Contig-U01283-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 604,368
End Point 603,387
Strand MINUS

Sequence Contig-U01283-1

ATTCCAAAGT TTACAAAAAA ACAAAAAAAA AAAATAAAAA AATAAACCAA
AGCAATCATG GACAGTTTAG AGATTGAGGT TATTCCAAGA CCTGATAAAG
ATGATAGATA TACAATTAAA CCATTAAAAG ATACACTTTC ATTTGATAAA
GGTTTCTTTT TAGCAGTTAG AGCAATTCAA TCAATAAGAA AAAAGAGTCA
AGGTAGTGTA ATCGTAGTTG GTATTGCTGG ACCATCAGGA GCTGGTAAAA
CTTCAATTGC TCAAAAAATC GTTTCTGTTT TACCAAAATC AATTTTAATT
TCATTAGATA ATTA------ ----TAAACA AGGTGTTACA GTGGACATGA
TTCATTCAGT ATTAAATAAA TCCACCATTC AAGAGAACAC AGCACGTTAC
TATGACATCT ATTTAATTCC ACCAAATACT ACTTTTGCAA ACTCATCATC
ATGTGATTGG ATTCGTGTTC GTAATGCCGA TGGTCAATAT AGCATTATGT
TTAGTGAGGA GATTAAAGAA GGTCCTTTCA TCATTTCACC ACGTGTCGAT
TTCGTCGTTG GTGTCAATAT GTTGGGTGGT CTAATGTCCT TGGGCTATCA
AATGGTTGCA ATCATTCATA GAAAATCAAC AATCTTTAAA GATGGTAAAA
TCATTATCTC TTATGATGAA CTTGAAGAAT TGGGTCAAAC ATTTGTTCAA
ATCAAAGGTT TCGATGCAAC CTCTGTTCAA GAAGCTGGTA AAAAATTAGG
TTTGGAAAAT AATTATCTTC AAAAATCTTA TATTGAATTA TATCAAGATA
AATATAAAAA ATCATTATCT GATAATTCAA CTGTAACAAC TTTACCAATT
GGTGGTATTA ATAATAATAA TACTATTAAT AATAACAATA ATAATAATAA
TAATAATAAT TTATCACTTT CAAATTTCAT TAATTCAAAA TTATAAATTA
AAAAGAAAAT AAAAAATATA TAAAAATATG TGTAATACCC AAAAAAAAAA
AAAAAAAAAA AAAAAAAAA

Translated Amino Acid Sequence Contig-U01283-1

<All Frames> 
ipkftkkqkkkikk*TKAIMDSLEIEVIPRPDKDDRYTIKPLKDTLSFDKGFFLAVRAIQ
SIRKKSQGSVIVVGIAGPSGAGKTSIAQKIVSVLPKSILISLDN---

---KQGVTVDMIHSVLNKSTIQENTARYYDIYLIPPNTTFANSSSCDWIRVRNADGQYSI
MFSEEIKEGPFIISPRVDFVVGVNMLGGLMSLGYQMVAIIHRKSTIFKDGKIIISYDELE
ELGQTFVQIKGFDATSVQEAGKKLGLENNYLQKSYIELYQDKYKKSLSDNSTVTTLPIGG
INNNNTINNNNNNNNNNNLSLSNFINSKL*ikkkikni*kyv*ypkkkkkkkkk


Homology Contig-U01283-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U01283-1 (Contig-U01283-1Q) /CSM_Contig/Conti...  1558  0.0
Contig-U11461-1 (Contig-U11461-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13497-1 (Contig-U13497-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U11499-1 (Contig-U11499-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U10846-1 (Contig-U10846-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U10699-1 (Contig-U10699-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U12714-1 (Contig-U12714-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11288-1 (Contig-U11288-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U10925-1 (Contig-U10925-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U09374-1 (Contig-U09374-1Q) /CSM_Contig/Conti...    36  0.10


Homology Contig-U01283-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ402090) Dictyostelium discoideum cDNA clone:dds20p07, 3' ...   854   0.0    2
(AU061627) Dictyostelium discoideum slug cDNA, clone SLF101.      539   e-151  2
(AU052787) Dictyostelium discoideum slug cDNA, clone SLF101.      404   e-149  3
(FN357508) Schistosoma mansoni genome sequence supercontig S...    50   0.19   1
(FS293024) Cynops pyrrhogaster mRNA, clone: Cp_aI_008_L03, 3...    48   0.76   1
(AC116358) Homo sapiens chromosome 5 clone RP11-679B13, comp...    46   1.4    4
(AC233799) Ornithorhynchus anatinus clone CH236-143B4, WORKI...    44   1.5    5
(AC158269) Ornithorhynchus anatinus clone OA_Bb-520B15, WORK...    44   2.3    4
(EJ405389) 1093012090378 Global-Ocean-Sampling_GS-28-01-01-1...    42   2.5    2
(DQ813662) Anticarsia gemmatalis nucleopolyhedrovirus, compl...    46   3.0    1


Homology Contig-U01283-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC016662_15(AC016662|pid:none) Arabidopsis thaliana chromosome 1...   135   3e-30
CP000594_315(CP000594|pid:none) Ostreococcus lucimarinus CCE9901...   134   4e-30
AF480496_13(AF480496|pid:none) Oryza sativa clone BAC 49D11, com...   130   7e-29
AK102236_1(AK102236|pid:none) Oryza sativa Japonica Group cDNA c...   130   7e-29
AC079829_16(AC079829|pid:none) Arabidopsis thaliana chromosome 1...   127   6e-28
EU730895_6(EU730895|pid:none) Brachypodium distachyon clone BAC ...   127   6e-28
(Q9GNF0) RecName: Full=Uridine-cytidine kinase D;          EC=2....    98   4e-19
AL731614_16(AL731614|pid:none) Oryza sativa genomic DNA, chromos...    93   1e-17
A84425(A84425) hypothetical protein At2g01460 [imported] - Arabi...    89   2e-16
AM463144_1(AM463144|pid:none) Vitis vinifera contig VV78X078650....    89   2e-16


<Clone: Contig-U01283-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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