Homology Contig-U01085-1 vs Protein

Query= Contig-U01085-1 (Contig-U01085-1Q) /CSM_Contig/Contig-U01085-1Q.Seq.d
         (1232 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117081_62(AC117081|pid:none) Dictyostelium discoideum chromoso...    48   8e-04
AE014185_364(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    34   9.4

>AC117081_62(AC117081|pid:none) Dictyostelium discoideum chromosome 2
            map 5862124-6045772 strain AX4, complete sequence.
          Length = 152

 Score = 47.8 bits (112), Expect = 8e-04
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
 Frame = -3

Query: 1155 CPHSNLSIEEAEENKSKYMWL--LTDPDEFPEFEPCVCTTDCKVKMVKIIDIILYNHYKF 982
            C H   S+ + ++++   ++L  L D DEF + +P  CT +CK KM +I  I    + +
Sbjct: 7    CQHDEFSLRKLKKSEDFTLYLDELLDQDEFLKIQPGYCTEECKQKMKEIYRITFERYIET 66

Query: 981  SRGYFEDCKMV---FGHGVKGLSLYEYTNFIK-------KNRFKERTELLTNLQYINGKI 832
               Y+ D ++     G   +G  ++ Y  F         ++ +         +   +GK
Sbjct: 67   INKYYSDSRIFEYNLGKNPRGCDIWMYREFFSTPPPISPQDEYARMVIKAMKVGIKDGKP 126

Query: 831  VRLCDV 814
            VRLC++
Sbjct: 127  VRLCEL 132

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,688,436,152
Number of extensions: 29790685
Number of successful extensions: 67921
Number of sequences better than 10.0: 2
Number of HSP's gapped: 67907
Number of HSP's successfully gapped: 2
Length of query: 410
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 279
Effective length of database: 627,191,635
Effective search space: 174986466165
Effective search space used: 174986466165
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)