Dictyostelium discoideum cDNA Contig-U00802-1

Assembled

Chromosomal Location of Contig-U00802-1

NO HIT FOUND.

Sequence Contig-U00802-1

AATGGTATTA ATTATAATGG TCATCAACAA AAGTTACATC ATCATCATCC
ACATGGTCAA ATTATTTATG ATCCACAACA ATCACCATCA CAAACACAAC
AACAACAACT TCACCACCTT CATCATCATG GACCTAATAG TGGTGGTAAT
TCACCGATTT CCACATCTCT TCCATCTTCG ACATCTTCAA CTCCAAATAT
AATTTCTGCT CATCATTATG GAAATTCAAA TGGAAATTTA AATAAAGTAA
TGTCATCATT TAGTTCATTT AATATTAGTG ATAATTCTTC AATAAATAAC
AATAATAATA ATAATGGTAA TGGTAATGAA AGACAAAGTG CAAATAATAC
TACTATTGGT GGTGGTGGTG GAAATAATCA CAATGGTGTG AATAGTGAAA
ATGGTAGAAT ACTTTCAAGA AATAACCATA ACCATAATAA TAGCAATCAT
ATTAGTCATA GTCATAATAA TCATAACCAT AATCATACTC ATCATAATCA
TAGCAATGTT GGGATTGGTG GTGGTGGTAG TGGTAGTGTT AGTGGGAACA
TTCACAATCC AAATTTATTA ATTGAACAGC AACAGCAACA ACAACAACAT
CTACAGTTAC AGCAACAACA GCAACAACAG CAACAACAAC AACAACAACA
ACAACAACAA CAACAACAAC ATCCATATAC TCAACAACAT ATGATGAATG
GTGGTATTCA ATATTATTAT CCTAGTCCAT ATGGTGAGCC ATTTTATCAA
ACTCATCCTC ATCAC----- -----CCCCC CCCCCCCNGG NAAAAAAAAN
GGNTAAACCC CCCCCCNAAG GGGGGGGGGG GGGGNNNNNN GGGGGGNCCC
CCCCCCAAAA ANCCNAAGGG NGGGGGGGGG GGGNCCCAGG GGGGNCCCCC
NAAGGGAANC CCAAANCCCC CCNAGNCCCC GGGGGGGCCC CATTTCCCCC
NGGGNANTTN NNNTTTTTTT TTTTTTTTAA ANNCCCCCNN GGNGGGGGGG
GGGCCNTTTN AAAAAAAATT TTTTTTTTTT TTTTTTGNAC AAAAAANAAN
NAAAAAAATT AAAAAAAAAA AAATAAAAAA AAAAA

Translated Amino Acid Sequence Contig-U00802-1

NGINYNGHQQKLHHHHPHGQIIYDPQQSPSQTQQQQLHHLHHHGPNSGGNSPISTSLPSS
TSSTPNIISAHHYGNSNGNLNKVMSSFSSFNISDNSSINNNNNNNGNGNERQSANNTTIG
GGGGNNHNGVNSENGRILSRNNHNHNNSNHISHSHNNHNHNHTHHNHSNVGIGGGGSGSV
SGNIHNPNLLIEQQQQQQQHLQLQQQQQQQQQQQQQQQQQQQQHPYTQQHMMNGGIQYYY
PSPYGEPFYQTHPHH---

---PPPPXXKKXXNPPPKGGGGGXXGGPPPKXPKGGGGGXQGGPPKGXPXPPXXPGGPHF
PXGXXXFFFFLXXPXXGGGPFXKKFFFFFFXQKXXKKIKKKKIKKK

Homology Contig-U00802-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U00802-1 (Contig-U00802-1Q) /CSM_Contig/Conti...   357  2e-98
Contig-U15357-1 (Contig-U15357-1Q) /CSM_Contig/Conti...   186  5e-47
Contig-U12001-1 (Contig-U12001-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U15714-1 (Contig-U15714-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U11340-1 (Contig-U11340-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U16217-1 (Contig-U16217-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U12283-1 (Contig-U12283-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09050-1 (Contig-U09050-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U03173-1 (Contig-U03173-1Q) /CSM_Contig/Conti...    44  4e-04

Homology Contig-U00802-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ358916) Dictyostelium discoideum cDNA clone:ddc11n19, 5' ...   317   e-150  3
(AU073061) Dictyostelium discoideum slug cDNA, clone SSF851.      141   5e-59  2
(BJ403671) Dictyostelium discoideum cDNA clone:dds25k24, 3' ...    52   4e-06  3
(BJ405424) Dictyostelium discoideum cDNA clone:dds31j17, 3' ...    52   7e-05  2
(AG266533) Homo sapiens DNA, clone: DN0736.                        38   1e-04  3
(AC119818) Mus musculus clone RP23-104A22, *** SEQUENCING IN...    52   6e-04  3
(BH094533) RPCI-24-357H22.TV RPCI-24 Mus musculus genomic cl...    52   6e-04  2
(DH477779) Monosiga ovata DNA, fosmid clone: MOF-028J10, gen...    52   0.001  2
(CS374589) Sequence 692 from Patent WO2006034879.                  52   0.002  3
(AM485160) Vitis vinifera contig VV78X192168.10, whole genom...    44   0.002  2

Homology Contig-U00802-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


FN357536_13(FN357536|pid:none) Schistosoma mansoni genome sequen...    46   0.002
(Q1ZXK2) RecName: Full=Formin-G;                                       45   0.003
(Q54WH2) RecName: Full=Formin-A;                                       44   0.010
AB082543_1(AB082543|pid:none) Dictyostelium discoideum forB gene...    44   0.010
AB082542_1(AB082542|pid:none) Dictyostelium discoideum forA mRNA...    44   0.010
(Q54SP2) RecName: Full=Formin-B;                                       44   0.010
AM412921_1(AM412921|pid:none) Drosophila simulans partial CG1674...    44   0.013
(Q2H922) RecName: Full=Actin cytoskeleton-regulatory complex pro...    43   0.022
AM270010_25(AM270010|pid:none) Aspergillus niger contig An02c015...    43   0.022
AY051669_1(AY051669|pid:none) Drosophila melanogaster LD22190 fu...    42   0.029