Homology Contig-U00447-1 vs Protein

Query= Contig-U00447-1 (Contig-U00447-1Q) /CSM_Contig/Contig-U00447-1Q.Seq.d
         (482 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM910985_93(AM910985|pid:none) Plasmodium knowlesi strain H chro...    33   4.4
CU640366_1392(CU640366|pid:none) Podospora anserina genomic DNA ...    32   9.8

>AM910985_93(AM910985|pid:none) Plasmodium knowlesi strain H
            chromosome 3, complete genome.
          Length = 3599

 Score = 32.7 bits (73), Expect = 4.4
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 250  FINKSLVILYMTYVRMIYSQHDDNLKXVDDTLSGLNHFEDISDSNS 387
            F+N+ +V  Y++  ++ +  H +    VD+ +  +NHF   SD NS
Sbjct: 1855 FLNRLIVERYISIKKIFWICHKERNSSVDNAIQVVNHFNRFSDINS 1900

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 287,073,526
Number of extensions: 2678458
Number of successful extensions: 4603
Number of sequences better than 10.0: 2
Number of HSP's gapped: 4601
Number of HSP's successfully gapped: 2
Length of query: 160
Length of database: 1,051,180,864
Length adjustment: 118
Effective length of query: 42
Effective length of database: 669,266,902
Effective search space: 28109209884
Effective search space used: 28109209884
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)