<Clone: Contig-U00447-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U00447-1

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Assembled

Chromosomal Location of Contig-U00447-1

< more Chromosomal info >

Chromosome Number 5
Length 5062330
Start Poin 2,332,184
End Point 2,332,661
Strand PLUS

Sequence Contig-U00447-1

ACTGGAAAAA ACAACCCATT TCATTAACAA TAATAAAACA ATATAATTAA
TTAAAATAAT ATTTTAATAT TATTTCTTTT TATCTGTATT TTTTTTTTTT
TTATTNAAAA AAAATTTTTT TTTTTTTTTT NTCCCAAAAA AAAAAAAAAA
AAAANAAAAA AAAAAAAAAA TTCCCCNNTA AAAAAANTAA AAAATTTTTT
TTAAAAAAAA A--------- -TTAGATCCA ATTANAAAAG TTGATATACT
TCATAAACAA ATCATTGGTN ATCCTATATA TGACTTATGT TAGAATGATT
TATTCTCAAC ATGATGATAA TTTAAAATTN GTTGATGATA CTCTAAGTGG
TTTAAATCAT TTTGAAGATA TTTCAGACTC CAACTCCAAT TNCACAACCA
CCACCACAAC AACCACAACA ACCACAACAA CCACAACAAC AAACTACAAC
TACAACTACA ACATCAAATC ATAATCATCA TA

Translated Amino Acid Sequence Contig-U00447-1

<All Frames> 
wkkqpisltiikqyn*lk*YFNIISFYLYFFFFYXKKIFFFFXSQKKKKKXKKKKKFPXK
KXKKFFLKK---

---LDPIXKVDILHKQIIGXPIYDLC*ndlfst***fkix**yskwfksf*ryfrlqlqx
hnhhhnnhnnhnnhnnklqlqlqhqiiiii


Homology Contig-U00447-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U00447-1 (Contig-U00447-1Q) /CSM_Contig/Conti...   295  3e-80
Contig-U15919-1 (Contig-U15919-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U15435-1 (Contig-U15435-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U15396-1 (Contig-U15396-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U14964-1 (Contig-U14964-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U12612-1 (Contig-U12612-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U10552-1 (Contig-U10552-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U10519-1 (Contig-U10519-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U05914-1 (Contig-U05914-1Q) /CSM_Contig/Conti...    36  0.048


Homology Contig-U00447-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ344123) Dictyostelium discoideum cDNA clone:dda18b17, 3' ...   319   5e-87  2
(EZ611504) TSA: Sarcophaga crassipalpis HAHN.FLY.11147.C2 mR...    44   5.5    1
(FN357470) Schistosoma mansoni genome sequence supercontig S...    44   5.5    1
(DX915135) gSpTor-913.bT7 Spironucleus Zap GSS Library Spiro...    44   5.5    1
(AL205983) Tetraodon nigroviridis genome survey sequence PUC...    44   5.5    1
(CX923072) JGI_CAAN9183.rev NIH_XGC_tropTe4 Xenopus (Siluran...    44   5.5    1
(CD088179) MC1-0048T-M150-H04-U.B MC1-0048 Schistosoma manso...    34   5.9    2


Homology Contig-U00447-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AM910985_93(AM910985|pid:none) Plasmodium knowlesi strain H chro...    33   4.4
CU640366_1392(CU640366|pid:none) Podospora anserina genomic DNA ...    32   9.8


<Clone: Contig-U00447-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home