Homology Contig-U00447-1 vs DNA
Query= Contig-U00447-1 (Contig-U00447-1Q) /CSM_Contig/Contig-U00447-1Q.Seq.d
(482 letters)
Database: ddbj_B
120,034,097 sequences; 115,169,689,543 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ344123) Dictyostelium discoideum cDNA clone:dda18b17, 3' ... 319 5e-87 2
(EZ611504) TSA: Sarcophaga crassipalpis HAHN.FLY.11147.C2 mR... 44 5.5 1
(FN357470) Schistosoma mansoni genome sequence supercontig S... 44 5.5 1
(DX915135) gSpTor-913.bT7 Spironucleus Zap GSS Library Spiro... 44 5.5 1
(AL205983) Tetraodon nigroviridis genome survey sequence PUC... 44 5.5 1
(CX923072) JGI_CAAN9183.rev NIH_XGC_tropTe4 Xenopus (Siluran... 44 5.5 1
(CD088179) MC1-0048T-M150-H04-U.B MC1-0048 Schistosoma manso... 34 5.9 2
>(BJ344123) Dictyostelium discoideum cDNA clone:dda18b17, 3' end, single read.
Length = 262
Score = 319 bits (161), Expect(2) = 5e-87
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 222 ttagatccaattanaaaagttgatatacttcataaacaaatcattggtnatcctatatat 281
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Sbjct: 262 ttagatccaattanaaaagttgatatacttcataaacaaatcattggtnatcctatatat 203
Query: 282 gacttatgttagaatgatttattctcaacatgatgataatttaaaattngttgatgatac 341
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Sbjct: 202 gacttatgttagaatgatttattctcaacatgatgataatttaaaattngttgatgatac 143
Query: 342 tctaagtggtttaaatcattttgaagatatttcagactccaactccaatt 391
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Sbjct: 142 tctaagtggtttaaatcattttgaagatatttcagactccaactccaatt 93
Score = 38.2 bits (19), Expect(2) = 5e-87
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcaaatcataatcatcata 482
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Sbjct: 20 tcaaatcataatcatcata 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 120034097
Number of Hits to DB: 245,492,338
Number of extensions: 15487865
Number of successful extensions: 1167440
Number of sequences better than 10.0: 7
Length of query: 482
Length of database: 115,169,689,543
Length adjustment: 23
Effective length of query: 459
Effective length of database: 112,408,905,312
Effective search space: 51595687538208
Effective search space used: 51595687538208
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
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