Dictyostelium discoideum cDNA Contig-U00301-1

Assembled

Chromosomal Location of Contig-U00301-1

Sequence Contig-U00301-1

CATTCAATTT TGTAATTATA AAAAAAGGAA TCAAATAATT ATATATATAT
ATAAAAATAT AAAAAAAATA AAATGAGAAT TTTATATTTA GCTTCTCTTT
TATTTTTAAT TACATTATAT CTATCACCAA CTTTTGGTTG GGGTGGTGGC
AGAGATTGTG AAAGTCATCG TTCAGAATAT ACATGTAAAT CAGATAGAAG
TTGTGCATAT TTACCATTTG TATCATGTTG TGGTAATATT CAATGTCCAT
GGGTCCACCA GTTGACCAAT GCCGTAATCA ACATTGTCCA CATGGTTATT
CATGTCGTGT CATTAAAGGT TGTGCCACTT GTGTCAGAGA TGCCCGTCCA
CCACATAACC TTTGTCGTGG TTTTGGTTGT CCAGAAGGCT CCCATTGTGA
AGTTCTTGAA AAACATCCAG TTTGTGTTAG AAATCATGTT NCACCACACC
CACCACCCAC CACCACAAAT TTGCGGTAGT GT

Translated Amino Acid Sequence Contig-U00301-1

hsil*l*kkesnnyiyi*KYKKNKMRILYLASLLFLITLYLSPTFGWGGGRDCESHRSEY
TCKSDRSCAYLPFVSCCGNIQCPWVHQLTNAVINIVHMVIHVVSLKVVPLVSEMPVHHIT
FVVVLVVQKAPIVKFLKNIQFVLEIMXHHTHHPPPQICGS

Homology Contig-U00301-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U00301-1 (Contig-U00301-1Q) /CSM_Contig/Conti...   728  0.0
Contig-U16368-1 (Contig-U16368-1Q) /CSM_Contig/Conti...   373  e-103
Contig-U00220-1 (Contig-U00220-1Q) /CSM_Contig/Conti...   323  1e-88
Contig-U16540-1 (Contig-U16540-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U15946-1 (Contig-U15946-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U14177-1 (Contig-U14177-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U09501-1 (Contig-U09501-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U06761-1 (Contig-U06761-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U15669-1 (Contig-U15669-1Q) /CSM_Contig/Conti...    34  0.19
Contig-U11930-1 (Contig-U11930-1Q) /CSM_Contig/Conti...    34  0.19

Homology Contig-U00301-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ323797) Dictyostelium discoideum cDNA clone:dda12e07, 5' ...   726   0.0    3
(D13973) Dictyostelium discoideum Dp87 gene for Dp87 protein...   373   0.0    5
(BJ324797) Dictyostelium discoideum cDNA clone:dda8g03, 5' e...   321   e-145  2
(BJ435466) Dictyostelium discoideum cDNA clone:ddv27p03, 3' ...   347   e-115  2
(AU060137) Dictyostelium discoideum slug cDNA, clone SLA402.      321   e-114  2
(BJ429279) Dictyostelium discoideum cDNA clone:ddv2n19, 3' e...   353   e-113  3
(BJ358657) Dictyostelium discoideum cDNA clone:ddc10o13, 5' ...   373   e-111  3
(BJ323715) Dictyostelium discoideum cDNA clone:dda11m22, 5' ...   373   e-111  3
(BJ391204) Dictyostelium discoideum cDNA clone:dds15h17, 5' ...   373   e-111  3
(BJ386895) Dictyostelium discoideum cDNA clone:dds11a07, 5' ...   373   e-111  3

Homology Contig-U00301-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;       128   2e-34
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...   128   2e-34
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    58   1e-07
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    47   2e-04
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    47   2e-04
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...    45   7e-04
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for...    45   7e-04
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa...    44   0.002
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region...    42   0.009
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...    42   0.009