Dictyostelium discoideum cDNA Contig-U00143-1

Assembled

Chromosomal Location of Contig-U00143-1

NO HIT FOUND.

Sequence Contig-U00143-1

TCATTGACTA TTAAATAAAA AAATAAATAA ATAATTAAAG AAATGAATTA
TTTAGTTGGT TTAGTCTTAA TTTTTACAAT TTTTTATTTT TTCCTCCAGA
AAAATGATAA AAATATGAAT TCAAAAATCC CAGGACCAAA AGGAATACCA
ATTCTTGGTA ATTTACCATC AATGAAAGGT GATCTTCATT TAAAATTACA
AGAATGGTAT AAACAATATG GAGTGATTTA CAGAATTAAA ATGGGTAACG
TAGAGACTGT TGTATTGACA GAATACCCAA TAATTAGAGA AGCATTCATT
GGTAATTCAA ATTCATTTGT TAATAGATTT CAAAGAAAGA GTAGACTAAA
GCTTAACAAT GGTGAGAATT TAGTGATTGT TAATGGTGAT ATTCATAATA
AACTAAAGAC ATTGGTATTA TCGGAAATGA CAAATCAAAG AATTAAAAAG
TATGAGACTA GTTTCATAGA TAATGAAATC AAGAAATTAT TTAAAGTTTT
AGATGAACAT GCAGATACTG GTAAACCAAT AATATTAAAT AACCACATTA
AAATGTTTTC AATGAATATT GTACTTTGTT TTACATTTGG TTTAAATTAT
TCTTATCCAT ATGATGAATT TGAAAAAGCA TCTGAATTTA TAAAATTAAT
GGTTGAATTT TTCAATATTG CAGGTCAACC TATCATT--- -------TGA
TATAATTTCC GCTGGTACTG ATACTTCTGC AAATACATTG GTTATGGCAT
TGATTTGGAA TTTAATAAAT AATCAAGAAA TTCAATCTAA AGCTTTTTCA
AGTATTAGAT CATCATGTTT AAATGATTCA AATGATGATG ATGATGATGA
TGAAATTGTA ATCACTCATA GTAAATATCG TTCATTATTA CCTTACATTT
CAATGATAAT TAAAGAAACA TTTAGAAGAC ATCCAATTGC TTTACTTGGT
TTACCACATG TTACAACTGA AGATGTTGAA ATTGATGGAT ATAAAATTGA
AGCTGGTACA TATATCATTC AAAATATTTT CTCAAGTCAT AGAAGTGATA
AAATTTTCCA ATCACCAAAT GAATTCATTC CAGAAAGATT CTTTGAATCA
TCTCAAAATC AAGGTTTAAT TCATTTTGGT TTAGGTGTTA GAGACTGTGT
TGGAAAGTCA TTGGCAGAGT GTGAAATTTT CACATTAATT GCAACCTTAT
TAAATAGATA TCAATTTATT AATCCAAATA ATTCAAAAAA ATTAAATGAT
ATTGGTACAT TTGGTTTGGC TCAAGTTTGT CCAGATACTA ATATTATTTT
AAAAAAAAGA ATTTAAAATA AAAATAAAAT AAAATTAAAA AATTAAAAAA
TAAAGAAA

Translated Amino Acid Sequence Contig-U00143-1

sltik*knk*IIKEMNYLVGLVLIFTIFYFFLQKNDKNMNSKIPGPKGIPILGNLPSMKG
DLHLKLQEWYKQYGVIYRIKMGNVETVVLTEYPIIREAFIGNSNSFVNRFQRKSRLKLNN
GENLVIVNGDIHNKLKTLVLSEMTNQRIKKYETSFIDNEIKKLFKVLDEHADTGKPIILN
NHIKMFSMNIVLCFTFGLNYSYPYDEFEKASEFIKLMVEFFNIAGQPII---

---DIISAGTDTSANTLVMALIWNLINNQEIQSKAFSSIRSSCLNDSNDDDDDDEIVITH
SKYRSLLPYISMIIKETFRRHPIALLGLPHVTTEDVEIDGYKIEAGTYIIQNIFSSHRSD
KIFQSPNEFIPERFFESSQNQGLIHFGLGVRDCVGKSLAECEIFTLIATLLNRYQFINPN
NSKKLNDIGTFGLAQVCPDTNIILKKRI*nknkiklkn*kikk

Homology Contig-U00143-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U00143-1 (Contig-U00143-1Q) /CSM_Contig/Conti...  1405  0.0
Contig-U00527-1 (Contig-U00527-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U05923-1 (Contig-U05923-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U01824-1 (Contig-U01824-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U00949-1 (Contig-U00949-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U16448-1 (Contig-U16448-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U15818-1 (Contig-U15818-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U15310-1 (Contig-U15310-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U13828-1 (Contig-U13828-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U12899-1 (Contig-U12899-1Q) /CSM_Contig/Conti...    36  0.14

Homology Contig-U00143-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ327809) Dictyostelium discoideum cDNA clone:dda21i19, 5' ...  1179   0.0    2
(AU061936) Dictyostelium discoideum slug cDNA, clone SLG684.     1084   0.0    2
(C90627) Dictyostelium discoideum slug cDNA, clone SSI868.        739   0.0    4
(BJ341262) Dictyostelium discoideum cDNA clone:dda5l21, 3' e...   755   0.0    3
(BJ388934) Dictyostelium discoideum cDNA clone:dds16g22, 5' ...   747   0.0    3
(C90256) Dictyostelium discoideum slug cDNA, clone SSI504.         46   3e-15  5
(GR585570) CCAA648.b1 CCAA Dictyostelium purpureum 0 hr star...    48   2e-11  4
(AU039893) Dictyostelium discoideum slug cDNA, clone SLG684.       40   2e-08  4
(AU039107) Dictyostelium discoideum slug cDNA, clone SSM394.       40   2e-08  4
(C91045) Dictyostelium discoideum slug cDNA, clone SSJ415.         40   4e-07  3

Homology Contig-U00143-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q1ZXG6) RecName: Full=Probable cytochrome P450 513A1;          ...   431   e-119
(Q1ZXI7) RecName: Full=Probable cytochrome P450 513F1;          ...   149   2e-34
(Q54WB9) RecName: Full=Probable cytochrome P450 513D1;          ...   149   3e-34
AP001298_1(AP001298|pid:none) Arabidopsis thaliana genomic DNA, ...    77   4e-25
(Q54LA8) RecName: Full=Probable cytochrome P450 555A1;          ...   117   1e-24
(Q54SV9) RecName: Full=Probable cytochrome P450 515B1;          ...   111   5e-23
AK290002_1(AK290002|pid:none) Homo sapiens cDNA FLJ75600 complet...   106   2e-21
AK304724_1(AK304724|pid:none) Homo sapiens cDNA FLJ51612 complet...   105   3e-21
AM183950_1(AM183950|pid:none) Homo sapiens mRNA for steroid 21-h...   103   1e-20
AB168699_1(AB168699|pid:none) Macaca fascicularis testis cDNA cl...   103   1e-20