Homology VSK262 vs Protein
Query= VSK262 (VSK262Q) /CSM/VS/VSK2-C/VSK262Q.Seq.d/
(651 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54QI4) RecName: Full=Homogentisate 1,2-dioxygenase; E... 375 e-102
AF189237_1(AF189237|pid:none) Dictyostelium discoideum homogenti... 375 e-102
GU589196_1(GU589196|pid:none) Ictalurus punctatus clone CBZB7022... 216 6e-55
(O09173) RecName: Full=Homogentisate 1,2-dioxygenase; E... 209 1e-52
(Q93099) RecName: Full=Homogentisate 1,2-dioxygenase; E... 209 1e-52
BC024369_1(BC024369|pid:none) Mus musculus homogentisate 1, 2-di... 209 1e-52
BC020792_1(BC020792|pid:none) Homo sapiens homogentisate 1,2-dio... 208 2e-52
AF000573_1(AF000573|pid:none) Homo sapiens homogentisate 1,2-dio... 208 2e-52
EU831603_1(EU831603|pid:none) Synthetic construct Homo sapiens c... 208 2e-52
AK290782_1(AK290782|pid:none) Homo sapiens cDNA FLJ78087 complet... 208 2e-52
FQ310508_137(FQ310508|pid:none) Dicentrarchus labrax chromosome ... 206 7e-52
AF189238_1(AF189238|pid:none) Danio rerio homogentisate 1,2-diox... 206 1e-51
BT127826_1(BT127826|pid:none) Dendroctonus ponderosae clone DPO0... 204 4e-51
BC080022_1(BC080022|pid:none) Xenopus laevis MGC82288 protein, m... 203 5e-51
FJ515744_1(FJ515744|pid:none) Bos taurus homogentisate 1,2-dioxy... 201 2e-50
BC112637_1(BC112637|pid:none) Bos taurus homogentisate 1,2-dioxy... 200 4e-50
FP929094_16(FP929094|pid:none) Leptosphaeria maculans JN3 lm_Sup... 195 1e-48
CP001472_303(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 193 7e-48
CP000473_6426(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 192 1e-47
T19626(T19626;T26239)hypothetical protein W06D4.1 - Caenorhabdit... 191 2e-47
AP007161_128(AP007161|pid:none) Aspergillus oryzae RIB40 DNA, SC... 187 4e-46
(A4JBW6) RecName: Full=Homogentisate 1,2-dioxygenase; E... 187 4e-46
AF131124_1(AF131124|pid:none) Drosophila melanogaster homogentis... 187 5e-46
(B1JWJ3) RecName: Full=Homogentisate 1,2-dioxygenase; E... 184 2e-45
(B4ECX5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 184 2e-45
(A0K4Z6) RecName: Full=Homogentisate 1,2-dioxygenase; E... 184 3e-45
CP000270_559(CP000270|pid:none) Burkholderia xenovorans LB400 ch... 184 3e-45
CP002519_481(CP002519|pid:none) Burkholderia sp. CCGE1001 chromo... 183 7e-45
AM270218_43(AM270218|pid:none) Aspergillus niger contig An11c001... 182 9e-45
BT054120_1(BT054120|pid:none) Zea mays full-length cDNA clone ZM... 182 1e-44
FN869568_68(FN869568|pid:none) Halomonas elongata DSM 2581, comp... 182 1e-44
CP002217_496(CP002217|pid:none) Burkholderia sp. CCGE1003 chromo... 181 2e-44
FQ311441_613(FQ311441|pid:none) Sporisorium reilianum SRZ2 chrom... 181 3e-44
FQ311872_75(FQ311872|pid:none) Azospirillum lipoferum 4B plasmid... 180 4e-44
CP000555_876(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 180 6e-44
AP010950_487(AP010950|pid:none) Azospirillum sp. B510 plasmid pA... 180 6e-44
BX842654_289(BX842654|pid:none) Bdellovibrio bacteriovorus compl... 178 2e-43
CP000270_1701(CP000270|pid:none) Burkholderia xenovorans LB400 c... 178 2e-43
FR854090_370(FR854090|pid:none) Ralstonia syzygii R24, genomic c... 177 3e-43
(Q9ZRA2) RecName: Full=Homogentisate 1,2-dioxygenase; E... 177 3e-43
JI174279_1(JI174279|pid:none) TSA: Ascaris suum ASCF_6760_1272 m... 177 3e-43
CP002600_2400(CP002600|pid:none) Burkholderia gladioli BSR3 chro... 177 5e-43
CP002745_3204(CP002745|pid:none) Collimonas fungivorans Ter331, ... 176 8e-43
CP002013_532(CP002013|pid:none) Burkholderia sp. CCGE1002 chromo... 176 8e-43
CP002986_3748(CP002986|pid:none) Stenotrophomonas maltophilia JV... 176 1e-42
AM743169_4096(AM743169|pid:none) Stenotrophomonas maltophilia K2... 176 1e-42
FQ859185_911(FQ859185|pid:none) Streptomyces cattleya str. NRRL ... 176 1e-42
(B8H072) RecName: Full=Homogentisate 1,2-dioxygenase; E... 176 1e-42
(Q2SYQ6) RecName: Full=Homogentisate 1,2-dioxygenase; E... 174 3e-42
(Q46UA4) RecName: Full=Homogentisate 1,2-dioxygenase; E... 174 4e-42
CP000091_459(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 174 4e-42
CP000570_3122(CP000570|pid:none) Burkholderia pseudomallei 668 c... 173 7e-42
CP001408_3299(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 173 7e-42
(A1V1U3) RecName: Full=Homogentisate 1,2-dioxygenase; E... 173 7e-42
CP003093_2927(CP003093|pid:none) Pseudoxanthomonas spadix BD-a59... 172 9e-42
CP002799_750(CP002799|pid:none) Sphingobium chlorophenolicum L-1... 172 2e-41
FR854064_643(FR854064|pid:none) blood disease bacterium R229, ge... 172 2e-41
CP002830_4290(CP002830|pid:none) Myxococcus fulvus HW-1, complet... 171 2e-41
(Q8XRZ0) RecName: Full=Homogentisate 1,2-dioxygenase; E... 171 3e-41
FQ790287_5(FQ790287|pid:none) Botryotinia fuckeliana isolate T4 ... 171 3e-41
CP002446_2483(CP002446|pid:none) Pseudoxanthomonas suwonensis 11... 171 3e-41
CU695240_229(CU695240|pid:none) Ralstonia solanacearum strain Mo... 170 6e-41
AP007155_182(AP007155|pid:none) Aspergillus oryzae RIB40 DNA, SC... 169 1e-40
CP002820_1022(CP002820|pid:none) Ralstonia solanacearum Po82 meg... 169 1e-40
AM920427_904(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 168 2e-40
(Q4UZI9) RecName: Full=Homogentisate 1,2-dioxygenase; E... 168 2e-40
AM920689_478(AM920689|pid:none) Xanthomonas campestris pv. campe... 168 2e-40
CP001029_1022(CP001029|pid:none) Methylobacterium populi BJ001, ... 166 9e-40
CP002789_3998(CP002789|pid:none) Xanthomonas campestris pv. raph... 166 9e-40
AP009493_5788(AP009493|pid:none) Streptomyces griseus subsp. gri... 166 1e-39
FR845719_1330(FR845719|pid:none) Streptomyces venezuelae ATCC 10... 165 1e-39
(A9I714) RecName: Full=Homogentisate 1,2-dioxygenase; E... 165 2e-39
FP929127_618(FP929127|pid:none) Leptosphaeria maculans JN3 lm_Su... 165 2e-39
CP001797_401(CP001797|pid:none) Pseudoalteromonas sp. SM9913 chr... 164 4e-39
CR954247_327(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 164 4e-39
(Q9S2B5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 162 9e-39
CP003057_449(CP003057|pid:none) Xanthomonas oryzae pv. oryzicola... 162 1e-38
CP002798_435(CP002798|pid:none) Sphingobium chlorophenolicum L-1... 161 3e-38
(Q3BYE8) RecName: Full=Homogentisate 1,2-dioxygenase; E... 161 3e-38
AY509194_1(AY509194|pid:none) Exophiala lecanii-corni homogentis... 160 5e-38
CP000699_3836(CP000699|pid:none) Sphingomonas wittichii RW1, com... 160 6e-38
CP002209_2852(CP002209|pid:none) Ferrimonas balearica DSM 9799, ... 159 8e-38
CP002047_8360(CP002047|pid:none) Streptomyces bingchenggensis BC... 159 1e-37
CP000272_939(CP000272|pid:none) Burkholderia xenovorans LB400 ch... 159 1e-37
CP003005_692(CP003005|pid:none) Myceliophthora thermophila ATCC ... 158 2e-37
FP929094_449(FP929094|pid:none) Leptosphaeria maculans JN3 lm_Su... 158 2e-37
CP001349_1146(CP001349|pid:none) Methylobacterium nodulans ORS 2... 158 2e-37
CP000316_2944(CP000316|pid:none) Polaromonas sp. JS666, complete... 158 2e-37
CP003009_2204(CP003009|pid:none) Thielavia terrestris NRRL 8126 ... 157 3e-37
(B3QB98) RecName: Full=Homogentisate 1,2-dioxygenase; E... 157 4e-37
CP002287_5534(CP002287|pid:none) Achromobacter xylosoxidans A8, ... 155 2e-36
CP002290_4180(CP002290|pid:none) Pseudomonas putida BIRD-1, comp... 154 3e-36
CP001804_5659(CP001804|pid:none) Haliangium ochraceum DSM 14365,... 154 3e-36
(Q6N0T9) RecName: Full=Homogentisate 1,2-dioxygenase; E... 154 3e-36
(Q1QPR8) RecName: Full=Homogentisate 1,2-dioxygenase; E... 154 3e-36
CU234118_6579(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 153 6e-36
(A5W8Z1) RecName: Full=Homogentisate 1,2-dioxygenase; E... 153 6e-36
JI169393_1(JI169393|pid:none) TSA: Ascaris suum ASCP_1547_1977 m... 153 8e-36
(Q21AX5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 153 8e-36
(Q89XH1) RecName: Full=Homogentisate 1,2-dioxygenase; E... 152 1e-35
(Q2KYC8) RecName: Full=Homogentisate 1,2-dioxygenase; E... 152 1e-35
CP000494_539(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 152 1e-35
(B1J390) RecName: Full=Homogentisate 1,2-dioxygenase; E... 151 2e-35
AP011177_2092(AP011177|pid:none) Shewanella violacea DSS12 DNA, ... 150 4e-35
CP002870_4388(CP002870|pid:none) Pseudomonas putida S16, complet... 150 5e-35
AY168855_2(AY168855|pid:none) Pseudomonas putida hmg transcripti... 150 6e-35
(Q2J1P2) RecName: Full=Homogentisate 1,2-dioxygenase; E... 149 8e-35
CP002014_947(CP002014|pid:none) Burkholderia sp. CCGE1002 chromo... 149 8e-35
(B3PWZ9) RecName: Full=Homogentisate 1,2-dioxygenase; E... 149 1e-34
(Q13CD3) RecName: Full=Homogentisate 1,2-dioxygenase; E... 149 1e-34
CP002663_2129(CP002663|pid:none) Pusillimonas sp. T7-7, complete... 147 4e-34
(Q2K9E5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 145 2e-33
EF546782_2(EF546782|pid:none) Pseudomonas chlororaphis hmg trans... 145 2e-33
CP001013_4277(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 144 3e-33
(Q48GS7) RecName: Full=Homogentisate 1,2-dioxygenase; E... 143 6e-33
CP002279_4940(CP002279|pid:none) Mesorhizobium opportunistum WSM... 143 6e-33
(Q4ZR64) RecName: Full=Homogentisate 1,2-dioxygenase; E... 143 6e-33
AK124291_1(AK124291|pid:none) Homo sapiens cDNA FLJ42297 fis, cl... 143 6e-33
CP002897_412(CP002897|pid:none) Paracoccus denitrificans SD1, co... 143 8e-33
(Q983J4) RecName: Full=Homogentisate 1,2-dioxygenase; E... 142 1e-32
(Q9X4F5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 142 1e-32
(Q3KHV3) RecName: Full=Homogentisate 1,2-dioxygenase; E... 142 1e-32
AM181176_1001(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 142 1e-32
(A6V6F5) RecName: Full=Homogentisate 1,2-dioxygenase; E... 142 2e-32
CP000362_3395(CP000362|pid:none) Roseobacter denitrificans OCh 1... 141 2e-32
CP002585_4999(CP002585|pid:none) Pseudomonas brassicacearum subs... 140 4e-32
(B9JHZ9) RecName: Full=Homogentisate 1,2-dioxygenase; E... 140 5e-32
CP000832_21(CP000832|pid:none) Dinoroseobacter shibae DFL 12 pla... 140 7e-32
CP000377_2620(CP000377|pid:none) Silicibacter sp. TM1040, comple... 138 3e-31
AF109214_1(AF109214|pid:none) Pseudomonas aeruginosa PAO1 homoge... 137 3e-31
(Q4KI35) RecName: Full=Homogentisate 1,2-dioxygenase; E... 136 1e-30
CP001751_1170(CP001751|pid:none) Candidatus Puniceispirillum mar... 135 1e-30
EU489065_3(EU489065|pid:none) Uncultured soil bacterium clone pY... 130 4e-29
CP000031_668(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 129 9e-29
FR687201_1297(FR687201|pid:none) Legionella pneumophila 130b dra... 127 3e-28
CU633445_100(CU633445|pid:none) Podospora anserina S mat+ genomi... 127 4e-28
(Q5X5S2) RecName: Full=Homogentisate 1,2-dioxygenase; E... 126 8e-28
(A5IBD8) RecName: Full=Homogentisate 1,2-dioxygenase; E... 126 8e-28
CP000749_2708(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 96 1e-18
FP929003_3016(FP929003|pid:none) Candidatus Nitrospira defluvii ... 49 2e-04
CP001798_1158(CP001798|pid:none) Nitrosococcus halophilus Nc4, c... 49 3e-04
BA000031_1350(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 46 0.002
CP001805_2042(CP001805|pid:none) Vibrio sp. Ex25 chromosome 1, c... 46 0.002
CP002727_2744(CP002727|pid:none) Pseudomonas fulva 12-X, complet... 45 0.002
CP000680_1686(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 44 0.005
CP002620_3146(CP002620|pid:none) Pseudomonas mendocina NK-01, co... 42 0.032
CP002284_1601(CP002284|pid:none) Vibrio anguillarum 775 chromoso... 41 0.054
AF457645_2(AF457645|pid:none) Listonella anguillarum 4-hydroxyph... 41 0.054
CP002881_762(CP002881|pid:none) Pseudomonas stutzeri ATCC 17588 ... 39 0.16
AE016825_970(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 39 0.16
CP002622_802(CP002622|pid:none) Pseudomonas stutzeri DSM 4166, c... 39 0.27
CP001737_510(CP001737|pid:none) Nakamurella multipartita DSM 442... 38 0.35
CP001738_934(CP001738|pid:none) Thermomonospora curvata DSM 4318... 37 0.79
CP001769_6206(CP001769|pid:none) Spirosoma linguale DSM 74, comp... 37 0.79
CP001399_651(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 36 1.3
CP002425_565(CP002425|pid:none) Sulfolobus islandicus REY15A, co... 36 1.3
CP001404_1928(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 36 1.3
AP008955_4086(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 36 1.3
CP002426_750(CP002426|pid:none) Sulfolobus islandicus HVE10/4, c... 36 1.3
CP002279_4480(CP002279|pid:none) Mesorhizobium opportunistum WSM... 35 3.0
CP002528_873(CP002528|pid:none) Krokinobacter sp. 4H-3-7-5, comp... 34 5.1
CR382139_1127(CR382139|pid:none) Debaryomyces hansenii chromosom... 34 5.1
CR382139_1022(CR382139|pid:none) Debaryomyces hansenii strain CB... 34 5.1
CP001699_5347(CP001699|pid:none) Chitinophaga pinensis DSM 2588,... 34 6.6
CP000356_340(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 34 6.6
CP002542_1951(CP002542|pid:none) Fluviicola taffensis DSM 16823,... 33 8.7
>(Q54QI4) RecName: Full=Homogentisate 1,2-dioxygenase;
EC=1.13.11.5; AltName: Full=Homogentisate oxygenase;
AltName: Full=Homogentisic acid oxidase; AltName:
Full=Homogentisicase;
Length = 432
Score = 375 bits (962), Expect = e-102
Identities = 181/188 (96%), Positives = 181/188 (96%)
Frame = +1
Query: 1 RIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHA 180
RIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHA
Sbjct: 65 RIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHA 124
Query: 181 SVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRG 360
SVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRG
Sbjct: 125 SVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRG 184
Query: 361 ITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGANGLANPRDFLSPVAAYEKKEGIEHTKX 540
ITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGANGLANPRDFLSPVAAYEKKEGIEHTK
Sbjct: 185 ITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGANGLANPRDFLSPVAAYEKKEGIEHTKI 244
Query: 541 XXXAKKNF 564
K F
Sbjct: 245 NKFLGKLF 252
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,630,465,462
Number of extensions: 34795782
Number of successful extensions: 72189
Number of sequences better than 10.0: 166
Number of HSP's gapped: 71876
Number of HSP's successfully gapped: 166
Length of query: 217
Length of database: 1,732,582,204
Length adjustment: 127
Effective length of query: 90
Effective length of database: 1,053,232,153
Effective search space: 94790893770
Effective search space used: 94790893770
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
Dictyostelium discoideum cDNA Project Home