Dictyostelium discoideum cDNA Clone VSK262

Sequence VSK262

CGTATTAGAC CATCAGTTTG TCATACACCA CTTAAACCAA TTGATTCAGG
ATTAGTTTGT GATTTAAATA ATTTACATGT TGATCCAAAT CAATTAAGAT
GGAAACCATT CCCAATTACA GAAGATAAAC CACACGATTT CGTTGAGGGT
CTCATTACAA TCGCTGGTGC TGGTCATGCA TCAGTACGTC ATGGTCTTGC
AATTCATATT TATACAGCAA CAAAGAGTAT GGAAAATAAA TCCTTTTATA
ACTCTGATGG TGATTTCTTA ATTGTACCAC AACAAGGTAC ATTAGATATT
CAAACAGAAT TTGGATTTAT GAAAGTTAAA TCAGGTGAGA TTTGTGTAAT
TCAAAGAGGT ATTACATTTA GTGTTAATGT TGAAGGACCA ACTAGAGGTT
ATATTTGTGA GGTGTTTGGA TCACATTTTA AACTTCCAGA TTTAGGACCA
ATTGGTGCTA ATGGTTTAGC AAATCCAAGA GATTTCTTAT CACCAGTTGC
AGCCTATGAA AAGAAGGAAG GTATTGAACA TACAAAG--- -------ANG
CNAAAAAAAA TTTTATTNAT TNTTNTTNNT GGAAAAGNTG GCNAGGNTTA
AANGAAAAAA AAAATATTGT CGNCAATAAT AATAAATCAT TNATAATAAT
A

Translated Amino Acid Sequence VSK262

RIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHA
SVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRG
ITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGANGLANPRDFLSPVAAYEKKEGIEHTK-
--

---AKKNFIXXXXWKXWXGLXEKKNIVXNNNKSXIII

Homology VSK262 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSK262 (VSK262Q) /CSM/VS/VSK2-C/VSK262Q.Seq.d/                       1065   0.0
CFF213 (CFF213Q) /CSM/CF/CFF2-A/CFF213Q.Seq.d/                       1065   0.0
SLG663 (SLG663Q) /CSM/SL/SLG6-C/SLG663Q.Seq.d/                        902   0.0
SHD714 (SHD714Q) /CSM/SH/SHD7-A/SHD714Q.Seq.d/                        839   0.0
VFB729 (VFB729Q) /CSM/VF/VFB7-B/VFB729Q.Seq.d/                        837   0.0
VFN835 (VFN835Q) /CSM/VF/VFN8-B/VFN835Q.Seq.d/                        686   0.0
VFL535 (VFL535Q) /CSM/VF/VFL5-B/VFL535Q.Seq.d/                        678   0.0
VFI324 (VFI324Q) /CSM/VF/VFI3-A/VFI324Q.Seq.d/                        587   e-167
VFO668 (VFO668Q) /CSM/VF/VFO6-C/VFO668Q.Seq.d/                        575   e-163
VFK866 (VFK866Q) /CSM/VF/VFK8-C/VFK866Q.Seq.d/                        573   e-162

Homology VSK262 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF189237) Dictyostelium discoideum homogentisate 1,2-dioxyg...  1063   0.0    1
(AU270901) Dictyostelium discoideum vegetative cDNA clone:VS...  1063   0.0    1
(AU061928) Dictyostelium discoideum slug cDNA, clone SLG663.      902   0.0    1
(BJ411426) Dictyostelium discoideum cDNA clone:ddv4j07, 5' e...   837   0.0    1
(BJ393387) Dictyostelium discoideum cDNA clone:dds31l03, 5' ...   777   0.0    3
(BJ358729) Dictyostelium discoideum cDNA clone:ddc11i04, 5' ...   769   0.0    1
(BJ417647) Dictyostelium discoideum cDNA clone:ddv28f10, 5' ...   686   0.0    1
(BJ415952) Dictyostelium discoideum cDNA clone:ddv24e09, 5' ...   678   0.0    1
(BJ413864) Dictyostelium discoideum cDNA clone:ddv17p05, 5' ...   587   e-163  1
(BJ417426) Dictyostelium discoideum cDNA clone:ddv30g18, 5' ...   575   e-160  1

Homology VSK262 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54QI4) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   375   e-102
AF189237_1(AF189237|pid:none) Dictyostelium discoideum homogenti...   375   e-102
GU589196_1(GU589196|pid:none) Ictalurus punctatus clone CBZB7022...   216   5e-55
(O09173) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   209   1e-52
(Q93099) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   209   1e-52
BC024369_1(BC024369|pid:none) Mus musculus homogentisate 1, 2-di...   209   1e-52
BC020792_1(BC020792|pid:none) Homo sapiens homogentisate 1,2-dio...   208   1e-52
AF000573_1(AF000573|pid:none) Homo sapiens homogentisate 1,2-dio...   208   1e-52
EU831603_1(EU831603|pid:none) Synthetic construct Homo sapiens c...   208   1e-52
AK290782_1(AK290782|pid:none) Homo sapiens cDNA FLJ78087 complet...   208   1e-52

Homology VSK262 vs Genome