Homology VSK256 vs Protein

Query= VSK256 (VSK256Q) /CSM/VS/VSK2-C/VSK256Q.Seq.d/
         (717 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116977_32(AC116977|pid:none) Dictyostelium discoideum chromoso...   148   4e-64
EU770222_5(EU770222|pid:none) Mycobacterium phage Predator, comp...    34   8.1

>AC116977_32(AC116977|pid:none) Dictyostelium discoideum chromosome
           2 map 5515173-5817331 strain AX4, complete sequence.
          Length = 2284

 Score =  148 bits (374), Expect(3) = 4e-64
 Identities = 73/74 (98%), Positives = 73/74 (98%)
 Frame = +3

Query: 414 SRKGEKELIDTPKNFIQLKITCKEMFQNSDNQDIDILFSDLSNFPIKDEITYQKFLTTSN 593
           SRKGEKELIDTPKNFIQLKITCKEMFQNSDNQDIDILFSDLSNFPIKDEITYQKFLTTSN
Sbjct: 90  SRKGEKELIDTPKNFIQLKITCKEMFQNSDNQDIDILFSDLSNFPIKDEITYQKFLTTSN 149

Query: 594 RNVLIXYFEGERIL 635
           RNVLI YFEGERIL
Sbjct: 150 RNVLICYFEGERIL 163

 Score =  103 bits (256), Expect(3) = 4e-64
 Identities = 55/71 (77%), Positives = 55/71 (77%)
 Frame = +2

Query: 107 SXTKSTPSIAEXXXXXXXXXXXXXXXLDDSLQSPKKLKSNNGQLTTSTGSPHQSRLSLGG 286
           S TKSTPSIAE               LDDSLQSPKKLKSNNGQLTTSTGSPHQSRLSLGG
Sbjct: 16  STTKSTPSIAETPTSTPPVTTTSTKTLDDSLQSPKKLKSNNGQLTTSTGSPHQSRLSLGG 75

Query: 287 STLVTKDIPES 319
           STLVTKDIPES
Sbjct: 76  STLVTKDIPES 86

 Score = 38.9 bits (89), Expect(3) = 4e-64
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +2

Query: 656 ILVDVTPSKNILLKAGTQKY 715
           ILVDVTPSKNILLKAGT +Y
Sbjct: 170 ILVDVTPSKNILLKAGTSEY 189

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,190,997,049
Number of extensions: 18846910
Number of successful extensions: 30643
Number of sequences better than 10.0: 2
Number of HSP's gapped: 30628
Number of HSP's successfully gapped: 4
Length of query: 239
Length of database: 1,732,582,204
Length adjustment: 128
Effective length of query: 111
Effective length of database: 1,047,882,940
Effective search space: 116315006340
Effective search space used: 116315006340
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)