Dictyostelium discoideum cDNA Clone VSK256

Sequence VSK256

AAAAATAATA AATATATAAA TATATTATTT AAATTTAGTT TTTTTATTTT
TATATATAAA AAATAAACAT AAACACGAAA ACAAAAAAAA AA--------
--CTNTTCAN CAACAAAATC AACTCCATCA ATAGCAGAAA CACCAACATC
TACACCTCCA GTAACAACAA CATCAACAAA AACTTTGGAT GATTCATTAC
AATCACCAAA AAAATTAAAA TCAAATAATG GACAACTAAC AACAAGTACA
GGTTCACCAC ATCAAAGTAG ATTATCATTG GGTGGATCTA CTTTGGTTAC
AAAAGATATA CCTGAAAGTA GTAAGTAGTA TATATATATT TATATTTACA
TACACAAATA TTATTAATCA TTTTTTACTA ATAATTTGAA AAAATAAATA
AATAGTTTTA TTATCAAGAA AAGGTGAAAA AGAATTAATT GATACACCAA
AAAATTTTAT TCAATTAAAA ATTACATGTA AAGAAATGTT TCAAAATAGT
GATAATCAAG ACATAGATAT TTTATTTTCA GATTTATCAA ATTTTCCAAT
TAAAGATGAA ATTACTTATC AAAAATTTCT TACTACATCA AATCGTAATG
TTTTAATATG NTATTTTGAA GGTGAAAGAA TTTTAGCATN ATGGTAGTGA
AGNAAATTTT AGTTGATGTA ACACCTTCAA AAAATATTTT ATTAAAAGCT
GGTACTCAGA AATATAA

Translated Amino Acid Sequence VSK256

kiini*IYYLNLVFLFLYIKNKHKHENKKK---

---XSXTKSTPSIAETPTSTPPVTTTSTKTLDDSLQSPKKLKSNNGQLTTSTGSPHQSRL
SLGGSTLVTKDIPESSK*yiyiyiyihkyy*sfftnnlkk*insfiikkr*krin*ytkk
fysiknym*rnvsk***srhryfifrfikfsn*r*nylskisyyiks*cfnmxf*r*knf
sxmvvkxilvdvtpsknillkagtqky

Homology VSK256 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSK256 (VSK256Q) /CSM/VS/VSK2-C/VSK256Q.Seq.d/                        720   0.0
AHM649 (AHM649Q) /CSM/AH/AHM6-C/AHM649Q.Seq.d/                        553   e-156
VSI578 (VSI578Q) /CSM/VS/VSI5-D/VSI578Q.Seq.d/                         46   7e-04
CFF179 (CFF179Q) /CSM/CF/CFF1-D/CFF179Q.Seq.d/                         46   7e-04
AHC572 (AHC572Q) /CSM/AH/AHC5-C/AHC572Q.Seq.d/                         46   7e-04
VSD315 (VSD315Q) /CSM/VS/VSD3-A/VSD315Q.Seq.d/                         40   0.045
SSL402 (SSL402Q) /CSM/SS/SSL4-A/SSL402Q.Seq.d/                         40   0.045
SSK562 (SSK562Q) /CSM/SS/SSK5-C/SSK562Q.Seq.d/                         40   0.045
SSI841 (SSI841Q) /CSM/SS/SSI8-B/SSI841Q.Seq.d/                         40   0.045
VSA157 (VSA157Q) /CSM/VS/VSA1-C/VSA157Q.Seq.d/                         38   0.18

Homology VSK256 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU270891) Dictyostelium discoideum vegetative cDNA clone:VS...   636   0.0    3
(BJ337161) Dictyostelium discoideum cDNA clone:dda56a14, 5' ...   452   0.0    3
(GR565805) CBTF1834.b1 CBTF Dictyostelium purpureum 12 hr ve...    60   5e-11  2
(CP000049) Borrelia turicatae 91E135, complete genome.             38   1e-04  13
(FV536045) Modified Microbial Nucleic Acid.                        36   0.001  11
(FV536044) Modified Microbial Nucleic Acid.                        36   0.001  11
(FV536357) Modified Microbial Nucleic Acid.                        38   0.002  7
(FV536356) Modified Microbial Nucleic Acid.                        38   0.002  7
(FV536345) Modified Microbial Nucleic Acid.                        38   0.003  8
(FV536344) Modified Microbial Nucleic Acid.                        38   0.003  8

Homology VSK256 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116977_32(AC116977|pid:none) Dictyostelium discoideum chromoso...   148   3e-64
EU770222_5(EU770222|pid:none) Mycobacterium phage Predator, comp...    34   7.9

Homology VSK256 vs Genome