Dictyostelium discoideum cDNA Clone VSJ559

Sequence VSJ559

ATTCTTATTA TTAATAAGTT TAATAGAAGA GCCGAAATTA ACAGCAATAA
AATATCCATT TACGTTACAA CCAGAAAAGA ATATAAAGTT TATAACTTTA
TTAAAGAAAT ATAAAAGACT AAGATAAATA AGAAAGAATA TAAGGGTCAA
CACTTGGCGA AAATGGTAGA CGCTATAGAC TTAAAATCTA TTTCTATATA
GAGTATCAGT TCAAGTCTGA TAGTGGAGAA CCCTACATTA TATACTAAAA
AAAAGAATGA TAAAAAAACT AAAAGGTAGG CAAAGAATAC AATTAATAGC
ATGTAATAAT ATAAATTATG TTTATAAAAC CGAATTTCAT TTAGGAGAAT
CCGCGTGGAA ATGGAACCCA ACGCTAAAAA GTTTTATATA TAAAGAAATT
AGTCAAATAC ATATAATAAG AATCCCCGCA TTTTTACTAA TAATAGGTAA
AGTGTTAAAT TTAATTAGAG AAGTAATGCG ATTTAGAGGA AAAGTAGTAA
TCGTAGCGAA TAATTTAGCA AATGGAAAAG TAATTGAACG ATTAGTAAAG
ACAATGAGAC AACCAGCGCT ACTAACAAAA TATTATGCAG GAGGGCTAAC
ACGAAAAACG GAGAATCTTA GACAATATTT AGAAGCAGAC AAAGGATTAA
CGAATCTGAA AGTGCGATCA AAGTATATAA AACAACTAAT AGGATTACAA
GACTTGGAGA GAAAACCTGC ATATATCGTA ATCTTAGATG CAATACAAGG
AAAATTTTTA ATAAATGAAA GTGCAATTTT AGGAATACCA ACAATAGGCT
GTGGAGATAC AACAATAAAT TTTCCAAAAT TGAACTATCC ATTAATAGGA
AATTTTAAAA GTAGAGAGAA AAGAGGTTCA GTATTATTAT TAATAAAGCA
TGCAATGTTT GAGGGAATGA GACAAGAAGC GACAATATTT GCAGAGTATT
ATAATAAATA TACAAGAATG TACAAGAGNC TTTTAAAAGT A

Translated Amino Acid Sequence VSJ559

flllislieepkltaikypftlqpeknikfitllkkykrlr*irknirvntwrkw*tl*t
*nlflyrvsvqv**WRTLHYILKKRMIKKLKGRQRIQLIACNNINYVYKTEFHLGESAWK
WNPTLKSFIYKEISQIHIIRIPAFLLIIGKVLNLIREVMRFRGKVVIVANNLANGKVIER
LVKTMRQPALLTKYYAGGLTRKTENLRQYLEADKGLTNLKVRSKYIKQLIGLQDLERKPA
YIVILDAIQGKFLINESAILGIPTIGCGDTTINFPKLNYPLIGNFKSREKRGSVLLLIKH
AMFEGMRQEATIFAEYYNKYTRMYKXLLKV

Homology VSJ559 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSJ559 (VSJ559Q) /CSM/VS/VSJ5-C/VSJ559Q.Seq.d/                       1427   0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/              1411   0.0
FC-AE19 (FC-AE19Q) /CSM/FC/FC-AE/FC-AE19Q.Seq.d/                     1074   0.0
VSH687 (VSH687Q) /CSM/VS/VSH6-D/VSH687Q.Seq.d/                       1027   0.0
VSI523 (VSI523Q) /CSM/VS/VSI5-A/VSI523Q.Seq.d/                        856   0.0
FC-IC1056 (FC-IC1056Q) /CSM/FC-IC/FC-IC1056Q.Seq.d/                   634   0.0
VSG578 (VSG578Q) /CSM/VS/VSG5-D/VSG578Q.Seq.d/                        470   e-131
VSE538 (VSE538Q) /CSM/VS/VSE5-B/VSE538Q.Seq.d/                        470   e-131
VSE534 (VSE534Q) /CSM/VS/VSE5-B/VSE534Q.Seq.d/                        470   e-131
VSB284 (VSB284Q) /CSM/VS/VSB2-D/VSB284Q.Seq.d/                        470   e-131

Homology VSJ559 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AB000109) Dictyostelium discoideum mitochondrial DNA, compl...  1400   0.0    2
(AU270114) Dictyostelium discoideum vegetative cDNA clone:VS...  1241   0.0    1
(AF155828) Dictyostelium discoideum NADH dehydrogenase subun...   460   0.0    6
(AU284259) Dictyostelium discoideum gamete cDNA clone:FC-AE1...   924   0.0    2
(AU267825) Dictyostelium discoideum vegetative cDNA clone:VS...  1015   0.0    2
(AU268824) Dictyostelium discoideum vegetative cDNA clone:VS...   856   0.0    1
(AU270113) Dictyostelium discoideum vegetative cDNA clone:VS...   492   0.0    3
(AU268825) Dictyostelium discoideum vegetative cDNA clone:VS...   731   0.0    1
(AU272090) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   634   e-177  1
(AU272089) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   517   e-142  1

Homology VSJ559 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9XPI7) RecName: Full=Ribosomal protein S2, mitochondrial;     ...   479   e-133
DQ336395_50(DQ336395|pid:none) Dictyostelium citrinum mitochondr...   352   1e-95
AY700145_28(AY700145|pid:none) Polysphondylium pallidum mitochon...   117   1e-24
EU275726_46(EU275726|pid:none) Polysphondylium pallidum strain P...   111   5e-23
EU275727_47(EU275727|pid:none) Dictyostelium fasciculatum strain...    91   8e-17
(Q68XV5) RecName: Full=30S ribosomal protein S2;  &AE017197_47(A...    88   8e-16
(Q9ZE61) RecName: Full=30S ribosomal protein S2;  &AJ235270_83(A...    87   2e-15
(Q4UND8) RecName: Full=30S ribosomal protein S2;  &CP000053_69(C...    85   7e-15
(A8GM32) RecName: Full=30S ribosomal protein S2;  &CP000847_120(...    84   2e-14
(A8F0I9) RecName: Full=30S ribosomal protein S2;                       83   3e-14

Homology VSJ559 vs Genome