Dictyostelium discoideum cDNA Clone VSJ545

Sequence VSJ545

CCACCATGTC ACAAAAAGTA GCTACCAAGA CTGCTCCAGT CCCAGAATCC
ATTCTCAAAA AGAGAGCCAC CTCCCAAAAG AAAGCTGTTG ATGTTGCTAA
ATTAGGAAGA GCTCAACAAT TGAGAAACAG CAGATTAAAC TCTGTCTATT
TCAAACGTGC TGAGAAATAC GTTTCTGAAT ACCACAAAAC CGAACGTGAA
GCCATCCGTT TAAACAGAAT CGCCAAAAAC TCTGGTACTT TCTACGTCCC
ACCAGCTGCC AAAGTTGCCT TTGTCATCCG TATTAGAGGT ATCAACGGTG
TCTCACCAAA GCCAAGAAAG GTCTTAAAGC TCCTCAGACT CTTACAATTA
AACAATGGTG TCTTTGTCAA ATTAAACAAA GCTTCAATCA ACATGCTCAA
ACTTGTTGAA CCATACGTTG CTTATGGTTT CCCAAATCTC AAATCAATCA
AAGAATTAAT CTACAAGAGA GGTCACTTAA AGATTGACGG TCAAAGAATC
CCATTAACCT CTAACGATAT GGTTGAAAAA CAACTCGGCA AATTCGGTAT
CATTTTGCGT TGAAGATATC ATCCACGAAA TCACCACTTG CGGTAAACAC
TTCAAACAAG TTAACAACTC TTTATGGCCA TTCAAATTAA ACTGTCCAAG
AGGTGGTTTC AACATGAAGA AAACTCCATT CCTCCAAGGT GGTGATGCTG
GTAACCGTGA ACACTTAATC AACAACCTCA TCCACAGAAN AACTAAATNN
ATAAAATAAA TATTAATTTT T

Translated Amino Acid Sequence VSJ545

TMSQKVATKTAPVPESILKKRATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEY
HKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGV
FVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGK
FGIILR*ryhprnhhlr*tlqts*qlfmaiqiklskrwfqheensipprw*cw*p*tlnq
qphpqxn*xxkininf

Homology VSJ545 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSJ545 (VSJ545Q) /CSM/VS/VSJ5-B/VSJ545Q.Seq.d/                       1511   0.0
VSF764 (VSF764Q) /CSM/VS/VSF7-C/VSF764Q.Seq.d/                       1473   0.0
VSF620 (VSF620Q) /CSM/VS/VSF6-A/VSF620Q.Seq.d/                       1453   0.0
VSD143 (VSD143Q) /CSM/VS/VSD1-B/VSD143Q.Seq.d/                       1421   0.0
VSD463 (VSD463Q) /CSM/VS/VSD4-C/VSD463Q.Seq.d/                       1378   0.0
VSD652 (VSD652Q) /CSM/VS/VSD6-C/VSD652Q.Seq.d/                       1368   0.0
FC-BH20 (FC-BH20Q) /CSM/FC/FC-BH/FC-BH20Q.Seq.d/                     1269   0.0
FC-AN05 (FC-AN05Q) /CSM/FC/FC-AN/FC-AN05Q.Seq.d/                     1253   0.0
VSH403 (VSH403Q) /CSM/VS/VSH4-A/VSH403Q.Seq.d/                       1229   0.0
VSC626 (VSC626Q) /CSM/VS/VSC6-B/VSC626Q.Seq.d/                       1074   0.0

Homology VSJ545 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU265512) Dictyostelium discoideum vegetative cDNA clone:VS...  1217   0.0    1
(AU265752) Dictyostelium discoideum vegetative cDNA clone:VS...  1124   0.0    1
(AU270090) Dictyostelium discoideum vegetative cDNA clone:VS...  1122   0.0    1
(X14909) Dictyolstelium discoideum mRNA for ribosomal protei...  1100   0.0    3
(AU284701) Dictyostelium discoideum gamete cDNA clone:FC-BH2...  1094   0.0    2
(AU263544) Dictyostelium discoideum vegetative cDNA clone:VS...  1080   0.0    1
(AU263545) Dictyostelium discoideum vegetative cDNA clone:VS...   957   0.0    3
(AU267388) Dictyostelium discoideum vegetative cDNA clone:VS...   876   0.0    2
(AU284340) Dictyostelium discoideum gamete cDNA clone:FC-AN0...   862   0.0    3
(AU264374) Dictyostelium discoideum vegetative cDNA clone:VS...   801   0.0    3

Homology VSJ545 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P11874) RecName: Full=60S ribosomal protein L7;  &R5DO7(S04849;...   321   e-121
AC114263_33(AC114263|pid:none) Dictyostelium discoideum chromoso...   310   e-118
AY961584_1(AY961584|pid:none) Lysiphlebus testaceipes ribosomal ...   184   1e-62
AK362712_1(AK362712|pid:none) Hordeum vulgare subsp. vulgare mRN...   176   2e-62
DQ084481_1(DQ084481|pid:none) Chaetomium globosum 60S ribosomal ...   186   2e-62
EF408834_1(EF408834|pid:none) Poecilia reticulata ribosomal prot...   171   2e-62
BT074739_1(BT074739|pid:none) Osmerus mordax clone omor-eva-519-...   171   3e-62
BT043873_1(BT043873|pid:none) Salmo salar clone HM4_1876 ribosom...   170   5e-62
AF175983_1(AF175983|pid:none) Rana sylvatica ribosomal protein L...   174   7e-62
FQ310508_168(FQ310508|pid:none) Dicentrarchus labrax chromosome ...   169   1e-61

Homology VSJ545 vs Genome