Dictyostelium discoideum cDNA Clone VSJ330

Sequence VSJ330

GAAAAAATGG TTCAAAGACT TACCTACAGA AGAAGATTAT CTTACCGTAC
TACTTCTAAC GCTACCAAAA TCGTCAAGAC TCCAGGTGGT AGATTAGTAT
ACCAATACAT CGGTAAAACT GGTAAAGTTC CAAGATGTGG TGAATGTGGT
GTCAACTTAG CCGGTATCCC AGCCTTAAGA CCATACCAAT ACAAAAATCT
TCCAAAATCA AGAAGAACTG TTTCACGTGC TTATGGTGGT AGCAAATGTG
CCAAATGTGT CCGTAACAGA ATCGTTCGTG CTTTCTTAAT TGAAGAACAA
AAAACCGCTA AAATTGTCTT CAAGAAGCAA CAAAAAGATT TAAAACAAAA
GAAAGATAAG AAATCATCCA AATAAATGTA GTGATTAATA TCAATCATTT
TTTACTTATA AAAAAAAAA- ---------G AAAAAATGGT TCAAAGACTT
ACCTACAGAA GAAGATTATC TTACCGTACT ACTTCTAACG CTACCAAAAT
CGTCAAGACT CCAGGTGGTA GATTAGTATA CCAATACATC GGTAAAACTG
GTAAAGTTCC AAGATGTGGT GAATGTGGTG TCAACTTAGC CGGTATCCCA
GCCTTAAGAC CATACCAATA CAAAAATCTT CCAAAATCAA GAAGAACTGT
TTCACGTGCT TATGGTGGTA GCAAATGTGC CAAATGTGTC CGTAACAGAA
TCGTTCGTGC TTTCTTAATT GAAGAACAAA AAACCGCTAA AATTGTCTTC
AAGAAGCAAC AAAAAGATTT AAAACAAAAG AAAGATAAGA AATCATCCAA
ATAAATGTAG NAATTAATAT CAATC

Translated Amino Acid Sequence VSJ330

kngsktylqkkiilpyyf*ryqnrqdsrw*isipihr*nw*sskmw*mwcqlsrypslkt
ipiqksskikkncftclww*qmcqmcp*qnrscfln*rtknr*nclqeatkrfktker*E
IIQINVVININHFLLIKKK---

---EKMVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIP
ALRPYQYKNLPKSRRTVSRAYGGSKCAKCVRNRIVRAFLIEEQKTAKIVFKKQQKDLKQK
KDKKSSK*m*xlisi

Homology VSJ330 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSJ330 (VSJ330Q) /CSM/VS/VSJ3-B/VSJ330Q.Seq.d/                        811   0.0
VSJ188 (VSJ188Q) /CSM/VS/VSJ1-D/VSJ188Q.Seq.d/                        811   0.0
VSI653 (VSI653Q) /CSM/VS/VSI6-C/VSI653Q.Seq.d/                        811   0.0
VSI411 (VSI411Q) /CSM/VS/VSI4-A/VSI411Q.Seq.d/                        811   0.0
VSI337 (VSI337Q) /CSM/VS/VSI3-B/VSI337Q.Seq.d/                        811   0.0
VSI288 (VSI288Q) /CSM/VS/VSI2-D/VSI288Q.Seq.d/                        811   0.0
VSH586 (VSH586Q) /CSM/VS/VSH5-D/VSH586Q.Seq.d/                        811   0.0
VSF802 (VSF802Q) /CSM/VS/VSF8-A/VSF802Q.Seq.d/                        811   0.0
VSF443 (VSF443Q) /CSM/VS/VSF4-B/VSF443Q.Seq.d/                        811   0.0
VSE858 (VSE858Q) /CSM/VS/VSE8-C/VSE858Q.Seq.d/                        811   0.0

Homology VSJ330 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU269760) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(AU269544) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(AU264054) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(AU261638) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(AU267672) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(AU268532) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(BJ390804) Dictyostelium discoideum cDNA clone:dds23d22, 5' ...   577   0.0    2
(AU268456) Dictyostelium discoideum vegetative cDNA clone:VS...   577   0.0    2
(BJ424483) Dictyostelium discoideum cDNA clone:ddv52g16, 5' ...   577   0.0    2
(BJ410566) Dictyostelium discoideum cDNA clone:ddv1d05, 5' e...   577   0.0    2

Homology VSJ330 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY857448_1(AY857448|pid:none) Suberites domuncula L34 mRNA, comp...   119   1e-25
CP003004_179(CP003004|pid:none) Myceliophthora thermophila ATCC ...   117   6e-25
CU633900_1002(CU633900|pid:none) Podospora anserina S mat+ genom...   116   2e-24
AP007159_572(AP007159|pid:none) Aspergillus oryzae RIB40 DNA, SC...   116   2e-24
FQ857264_14(FQ857264|pid:none) Piriformospora indica PIRI_contig...   115   2e-24
CP003012_994(CP003012|pid:none) Thielavia terrestris NRRL 8126 c...   115   3e-24
AM920433_411(AM920433|pid:none) Penicillium chrysogenum Wisconsi...   115   3e-24
AM270139_3(AM270139|pid:none) Aspergillus niger contig An07c0220...   115   4e-24
AF378548_1(AF378548|pid:none) Ophiostoma novo-ulmi clone 10 ribo...   114   6e-24
EU810310_1(EU810310|pid:none) Gymnochlora stellata 60S ribosomal...   110   9e-23

Homology VSJ330 vs Genome