Dictyostelium discoideum cDNA Clone VSJ105

Sequence VSJ105

CTCTCGCTGG TACTTGGGCT TCTATTGGTA GTGCTGTAGG TGTTGGTTGT
TCTGCAAATG ATGATCTCAC TGTTGATGGT GCCGCTTTAT GGTTAAAATC
AATTCCAGCA GATAAAAGAG CTTTAGTTTA TTATACAACT ACTCAATATA
GTACTGGTTC TTTAATTAAT TATTGTAATT TGGCTTCCAA TGCAGTCTTA
GAATGGCCAA ATGATGGTGT TGTTGATAAT GAGCATACTC CACTCGAAGG
TGGTGTATAT TTAAATAACT TTAAAGACTG GTGTCACTCT GATGGTATGC
ACTCACCACA ACAAACTACA AATACTGAAT ATAACAAAGA AATGAGTTCC
AACTCTGTTT GGTAAACTAC TTTGTATTAT TTTTTTTTCT CTACAATAAT
TGTAATAAAA TCGATTTATA TTAAATTTAT TGTCACTTTA TAATTAAAAA
AAAAA----- -----CTCTC GCTGGTACTT GGGCTTCTAT TGGTAGTGCT
GTAGGTGTTG GTTGTTCTGC AAATGATGAT CTCACTGTTG ATGGTGCCGC
TTTATGGTTA AAATCAATTC CAGCAGATAA AAGAGCTTTA GTTTATTATA
CAACTACTCA ATATAGTACT GGTTCTTTAA TTAATTATTG TAATTTGGCT
TCCAATGCAG TCTTAGAATG GCCAAATGAT GGTGTTGTTG ATAATGAGCA
TACTCCACTC GAAGGTGGTG TATATTTAAA TAACTTTAAA GACTGGTGTC
ACTCTGATGG TATGCACTCA CCACAACAAA CTACAAATAC TGAATATAAC
AAAGAAATGA GTTCCAACTC TGTTTGGTAA ACTACTTTGT ATTATTTTTT
TTTCTCT

Translated Amino Acid Sequence VSJ105

srwylgfyw*ccrcwlfck**shc*wcrfmvkinssr*ksfsllynysi*ywffn*ll*f
gfqcslrmak*wcc***aystrrwcifk*l*rlvsl*wyaltttnyky*i*qrnefqlcl
vnyfvlffflynncnkidly*IYCHFIIKKK---

---LAGTWASIGSAVGVGCSANDDLTVDGAALWLKSIPADKRALVYYTTTQYSTGSLINY
CNLASNAVLEWPNDGVVDNEHTPLEGGVYLNNFKDWCHSDGMHSPQQTTNTEYNKEMSSN
SVW*ttlyyfffs

Homology VSJ105 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSK240 (VSK240Q) /CSM/VS/VSK2-B/VSK240Q.Seq.d/                        829   0.0
VSJ105 (VSJ105Q) /CSM/VS/VSJ1-A/VSJ105Q.Seq.d/                        829   0.0
VSE772 (VSE772Q) /CSM/VS/VSE7-C/VSE772Q.Seq.d/                        819   0.0
VHQ437 (VHQ437Q) /CSM/VH/VHQ4-B/VHQ437Q.Seq.d/                        819   0.0
VHP806 (VHP806Q) /CSM/VH/VHP8-A/VHP806Q.Seq.d/                        819   0.0
VHP701 (VHP701Q) /CSM/VH/VHP7-A/VHP701Q.Seq.d/                        819   0.0
VHP580 (VHP580Q) /CSM/VH/VHP5-D/VHP580Q.Seq.d/                        819   0.0
VHP430 (VHP430Q) /CSM/VH/VHP4-B/VHP430Q.Seq.d/                        819   0.0
VHO841 (VHO841Q) /CSM/VH/VHO8-B/VHO841Q.Seq.d/                        819   0.0
VHO695 (VHO695Q) /CSM/VH/VHO6-D/VHO695Q.Seq.d/                        819   0.0

Homology VSJ105 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU270861) Dictyostelium discoideum vegetative cDNA clone:VS...   751   0.0    2
(AU269411) Dictyostelium discoideum vegetative cDNA clone:VS...   751   0.0    2
(BJ445671) Dictyostelium discoideum cDNA clone:ddv60b12, 3' ...   751   0.0    2
(BJ437146) Dictyostelium discoideum cDNA clone:ddv33h12, 3' ...   751   0.0    2
(BJ445677) Dictyostelium discoideum cDNA clone:ddv60c12, 3' ...   751   0.0    2
(BJ446642) Dictyostelium discoideum cDNA clone:ddv63j10, 3' ...   751   0.0    2
(BJ437032) Dictyostelium discoideum cDNA clone:ddv33a04, 3' ...   751   0.0    2
(BJ446509) Dictyostelium discoideum cDNA clone:ddv62o19, 3' ...   751   0.0    2
(BJ446204) Dictyostelium discoideum cDNA clone:ddv62b01, 3' ...   751   0.0    2
(BJ445878) Dictyostelium discoideum cDNA clone:ddv60m24, 3' ...   751   0.0    2

Homology VSJ105 vs Protein

Sequences producing significant alignments:                      (bits) Value


AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...   101   4e-20
CP002789_4122(CP002789|pid:none) Xanthomonas campestris pv. raph...   100   2e-19
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...   100   2e-19
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...   100   2e-19
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...    99   3e-19

Homology VSJ105 vs Genome