Homology VSI753 vs Protein
Query= VSI753 (VSI753Q) /CSM/VS/VSI7-C/VSI753Q.Seq.d/
(808 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY857448_1(AY857448|pid:none) Suberites domuncula L34 mRNA, comp... 119 1e-25
CP003004_179(CP003004|pid:none) Myceliophthora thermophila ATCC ... 117 5e-25
CU633900_1002(CU633900|pid:none) Podospora anserina S mat+ genom... 116 2e-24
AP007159_572(AP007159|pid:none) Aspergillus oryzae RIB40 DNA, SC... 116 2e-24
FQ857264_14(FQ857264|pid:none) Piriformospora indica PIRI_contig... 115 2e-24
CP003012_994(CP003012|pid:none) Thielavia terrestris NRRL 8126 c... 115 3e-24
AM920433_411(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 115 3e-24
AM270139_3(AM270139|pid:none) Aspergillus niger contig An07c0220... 115 3e-24
AF378548_1(AF378548|pid:none) Ophiostoma novo-ulmi clone 10 ribo... 114 6e-24
EU810310_1(EU810310|pid:none) Gymnochlora stellata 60S ribosomal... 110 8e-23
AE016817_327(AE016817|pid:none) Ashbya gossypii ATCC 10895 chrom... 110 1e-22
CP002500_316(CP002500|pid:none) Eremothecium cymbalariae DBVPG#7... 110 1e-22
HE580271_466(HE580271|pid:none) Naumovozyma dairenensis CBS 421 ... 109 1e-22
CR382136_623(CR382136|pid:none) Debaryomyces hansenii strain CBS... 109 2e-22
CR382129_184(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 109 2e-22
HE605206_891(HE605206|pid:none) Candida parapsilosis strain CDC3... 108 3e-22
HE576756_312(HE576756|pid:none) Naumovozyma castellii CBS 4309 c... 108 3e-22
HE576752_1328(HE576752|pid:none) Naumovozyma castellii CBS 4309 ... 108 3e-22
CR380959_541(CR380959|pid:none) Candida glabrata strain CBS138 c... 108 3e-22
HE580267_243(HE580267|pid:none) Naumovozyma dairenensis CBS 421 ... 108 4e-22
JO843270_1(JO843270|pid:none) TSA: Amblyomma maculatum Am-9194 m... 107 6e-22
EF633958_1(EF633958|pid:none) Ornithodoros parkeri clone OP-77 6... 107 6e-22
(P40525) RecName: Full=60S ribosomal protein L34-B; &FN393074_1... 107 7e-22
EU124982_1(EU124982|pid:none) Arenicola marina ribosomal protein... 107 9e-22
CP000286_720(CP000286|pid:none) Cryptococcus gattii WM276 chromo... 106 1e-21
GU372981_1(GU372981|pid:none) Karlodinium veneficum strain CCMP2... 106 2e-21
GQ152597_1(GQ152597|pid:none) Karlodinium veneficum strain CCMP1... 106 2e-21
CR940352_468(CR940352|pid:none) Theileria annulata strain Ankara... 105 2e-21
AY072290_1(AY072290|pid:none) Spodoptera frugiperda ribosomal pr... 104 6e-21
GU084335_1(GU084335|pid:none) Manduca sexta ribosomal protein L3... 104 6e-21
FQ311471_294(FQ311471|pid:none) Sporisorium reilianum SRZ2 chrom... 104 6e-21
HQ424738_1(HQ424738|pid:none) Euphydryas aurinia ribosomal prote... 104 6e-21
AY769303_1(AY769303|pid:none) Bombyx mori ribosomal protein L34 ... 104 6e-21
AK369838_1(AK369838|pid:none) Hordeum vulgare subsp. vulgare mRN... 103 1e-20
FR839628_978(FR839628|pid:none) Pichia pastoris CBS 7435 chromos... 103 1e-20
GQ152599_1(GQ152599|pid:none) Karlodinium veneficum strain CCMP1... 103 1e-20
FN392319_1013(FN392319|pid:none) Pichia pastoris GS115 chromosom... 103 1e-20
AY071577_1(AY071577|pid:none) Drosophila melanogaster RE63456 fu... 102 2e-20
BT127667_1(BT127667|pid:none) Dendroctonus ponderosae clone DPO1... 101 4e-20
AY168761_1(AY168761|pid:none) Branchiostoma belcheri tsingtaunes... 101 5e-20
FM207680_1(FM207680|pid:none) Angiostrongylus cantonensis mRNA f... 100 7e-20
AE014297_4355(AE014297|pid:none) Drosophila melanogaster chromos... 100 7e-20
EU603270_1(EU603270|pid:none) Ceratitis capitata ribosomal prote... 100 9e-20
EZ423821_1(EZ423821|pid:none) TSA: Glossina morsitans morsitans ... 100 9e-20
EU558377_1(EU558377|pid:none) Phoronis muelleri putative 60S rib... 100 2e-19
CR382123_360(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 100 2e-19
EU139231_1(EU139231|pid:none) Flustra foliacea putative 60S ribo... 99 2e-19
EU958413_1(EU958413|pid:none) Zea mays clone 1689686 60S ribosom... 99 3e-19
(Q90YT5) RecName: Full=60S ribosomal protein L34; &AF401588_1(A... 99 3e-19
EF634776_1(EF634776|pid:none) Pristionchus sp. 15 RS5229 large s... 99 3e-19
FN330936_1(FN330936|pid:none) Schistosoma japonicum isolate Anhu... 98 4e-19
AY961558_1(AY961558|pid:none) Lysiphlebus testaceipes ribosomal ... 98 4e-19
FN321665_1(FN321665|pid:none) Schistosoma japonicum isolate Anhu... 98 4e-19
FN321661_1(FN321661|pid:none) Schistosoma japonicum isolate Anhu... 98 4e-19
BT041960_1(BT041960|pid:none) Zea mays full-length cDNA clone ZM... 98 4e-19
AM049116_1(AM049116|pid:none) Timarcha balearica mRNA for riboso... 98 4e-19
FN330822_1(FN330822|pid:none) Schistosoma japonicum isolate Anhu... 98 4e-19
AB374972_1(AB374972|pid:none) Solea senegalensis RPL34 mRNA for ... 97 1e-18
FR823391_86(FR823391|pid:none) Neospora caninum Liverpool comple... 97 1e-18
AY894073_1(AY894073|pid:none) Synthetic construct Homo sapiens c... 97 1e-18
BC077039_1(BC077039|pid:none) Xenopus tropicalis ribosomal prote... 97 1e-18
EF541360_1(EF541360|pid:none) Lygus lineolaris clone E67 ribosom... 97 1e-18
(P49207) RecName: Full=60S ribosomal protein L34; &AB061832_1(A... 97 1e-18
AK370159_1(AK370159|pid:none) Hordeum vulgare subsp. vulgare mRN... 97 1e-18
AY079177_1(AY079177|pid:none) Xenopus laevis ribosomal protein L... 97 1e-18
AY533224_1(AY533224|pid:none) Chinchilla lanigera ribosomal prot... 96 2e-18
DQ213777_1(DQ213777|pid:none) Taeniopygia guttata clone 0061P001... 96 2e-18
AY961493_1(AY961493|pid:none) Lysiphlebus testaceipes ribosomal ... 96 2e-18
AP005159_8(AP005159|pid:none) Oryza sativa Japonica Group genomi... 96 2e-18
AK354771_1(AK354771|pid:none) Hordeum vulgare subsp. vulgare mRN... 96 2e-18
AK103424_1(AK103424|pid:none) Oryza sativa Japonica Group cDNA c... 96 2e-18
BT043734_1(BT043734|pid:none) Salmo salar clone HM6_0427 ribosom... 96 2e-18
BT058335_1(BT058335|pid:none) Salmo salar clone Contig4012 60S r... 96 2e-18
FN357448_27(FN357448|pid:none) Schistosoma mansoni genome sequen... 96 2e-18
BT089955_1(BT089955|pid:none) Soybean clone JCVI-FLGm-3A24 unkno... 96 3e-18
EF634762_1(EF634762|pid:none) Pristionchus entomophagus large su... 96 3e-18
EF634761_1(EF634761|pid:none) Pristionchus lheritieri large subu... 96 3e-18
BC099259_1(BC099259|pid:none) Xenopus laevis ribosomal protein L... 95 4e-18
EZ420060_1(EZ420060|pid:none) TSA: Simulium nigrimanum Sim-782 m... 95 4e-18
EF634759_1(EF634759|pid:none) Pristionchus pacificus large subun... 95 4e-18
EF634766_1(EF634766|pid:none) Pristionchus aerivorus large subun... 95 4e-18
CU928165_166(CU928165|pid:none) Kluyveromyces thermotolerans str... 95 5e-18
EF634764_1(EF634764|pid:none) Pristionchus sp. 3 CZ3975 large su... 95 5e-18
AY846826_1(AY846826|pid:none) Triticum aestivum ribosomal protei... 95 5e-18
BT036294_1(BT036294|pid:none) Zea mays full-length cDNA clone ZM... 95 5e-18
EF634760_1(EF634760|pid:none) Pristionchus maupasi large subunit... 95 5e-18
I68524(I68524) ribosomal protein L34 - human &L38941_1(L38941|p... 95 5e-18
DQ440044_1(DQ440044|pid:none) Aedes aegypti clone AE-288 60S rib... 94 6e-18
DQ413227_1(DQ413227|pid:none) Acyrthosiphon pisum isolate WHAP03... 94 6e-18
(P45842) RecName: Full=60S ribosomal protein L34; AltName: Full=... 94 8e-18
(Q9NB34) RecName: Full=60S ribosomal protein L34; &AF271207_1(A... 94 8e-18
EU976530_1(EU976530|pid:none) Zea mays clone 896857 60S ribosoma... 94 8e-18
FP929072_34(FP929072|pid:none) Leptosphaeria maculans JN3 lm_Sup... 94 8e-18
EZ114830_1(EZ114830|pid:none) TSA: Ochlerotatus triseriatus OT-2... 94 8e-18
EU961380_1(EU961380|pid:none) Zea mays clone 234960 60S ribosoma... 94 8e-18
GU373021_1(GU373021|pid:none) Amphidinium carterae strain CCMP13... 93 1e-17
AC148762_14(AC148762|pid:none) Medicago truncatula clone mth2-15... 93 1e-17
BT089578_1(BT089578|pid:none) Soybean clone JCVI-FLGm-2G6 unknow... 93 1e-17
BT070992_1(BT070992|pid:none) Picea sitchensis clone WS02763_M17... 93 1e-17
BT050641_1(BT050641|pid:none) Medicago truncatula clone MTYF1_F2... 93 1e-17
AM478818_1(AM478818|pid:none) Vitis vinifera contig VV79X003453.... 93 1e-17
EU972976_1(EU972976|pid:none) Zea mays clone 391038 60S ribosoma... 93 2e-17
X14401_1(X14401|pid:none) R.rattus mRNA for ribosomal protein L34. 93 2e-17
EF634777_1(EF634777|pid:none) Koerneria sp. RS1982 large subunit... 92 3e-17
EU952523_1(EU952523|pid:none) Zea mays clone 1282288 60S ribosom... 92 3e-17
AF043695_3(AF043695|pid:none) Caenorhabditis elegans cosmid C42C... 92 4e-17
EF144524_1(EF144524|pid:none) Populus trichocarpa clone PX0019_P... 91 7e-17
EF146328_1(EF146328|pid:none) Populus trichocarpa clone WS0117_D... 91 7e-17
(P41098) RecName: Full=60S ribosomal protein L34; &L27089_1(L27... 91 9e-17
(P0DJ23) RecName: Full=60S ribosomal protein L34; 90 1e-16
AM910983_88(AM910983|pid:none) Plasmodium knowlesi strain H chro... 90 1e-16
AY174764_1(AY174764|pid:none) Orobanche cumana 60S ribosomal pro... 88 5e-16
(Q9LJW6) RecName: Full=60S ribosomal protein L34-3; &AP000386_7... 88 5e-16
AL844506_109(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 87 1e-15
AM849535_1(AM849535|pid:none) Pomphorhynchus laevis partial mRNA... 84 9e-15
BT078581_1(BT078581|pid:none) Lepeophtheirus salmonis Pacific fo... 82 2e-14
BT080248_1(BT080248|pid:none) Caligus clemensi clone ccle-evs-50... 81 6e-14
BT075898_1(BT075898|pid:none) Caligus rogercresseyi clone crog-e... 79 2e-13
FJ774817_1(FJ774817|pid:none) Scylla paramamosain putative 60S r... 79 2e-13
AY548905_2(AY548905|pid:none) Antonospora locustae DIS3 protein-... 79 3e-13
FP565824_1(FP565824|pid:none) Brachiola algerae, large subunit r... 76 2e-12
AY909414_1(AY909414|pid:none) Siniperca chuatsi clone C46 60S ri... 76 2e-12
(Q29223) RecName: Full=60S ribosomal protein L34; 74 1e-11
CP002684_3539(CP002684|pid:none) Arabidopsis thaliana chromosome... 72 3e-11
U97397_1(U97397|pid:none) Schizosaccharomyces pombe unknown prot... 70 2e-10
CP001944_60(CP001944|pid:none) Encephalitozoon intestinalis ATCC... 68 6e-10
CP001901_1500(CP001901|pid:none) Methanocaldococcus sp. FS406-22... 66 2e-09
FN315809_1(FN315809|pid:none) Schistosoma japonicum isolate Anhu... 65 3e-09
AY730338_9(AY730338|pid:none) Solanum tuberosum strain P6/210 cl... 64 7e-09
CP001787_995(CP001787|pid:none) Methanocaldococcus vulcanius M7,... 64 7e-09
HE573026_1244(HE573026|pid:none) Trypanosoma vivax Y486 annotate... 64 9e-09
FJ362597_1(FJ362597|pid:none) Vernicia fordii 60S ribosomal prot... 64 9e-09
CP001696_923(CP001696|pid:none) Methanocaldococcus fervens AG86,... 64 9e-09
FN554973_1511(FN554973|pid:none) Trypanosoma brucei gambiense DA... 64 9e-09
HQ291443_1(HQ291443|pid:none) Nosema bombycis clone NBO_15g0024 ... 64 1e-08
(Q1WBV0) RecName: Full=60S ribosomal protein L34; &DQ407504_1(D... 63 2e-08
FN554974_1088(FN554974|pid:none) Trypanosoma brucei gambiense DA... 62 3e-08
AY762981_1(AY762981|pid:none) Homo sapiens leukemia-associated p... 62 3e-08
CP002009_109(CP002009|pid:none) Methanocaldococcus infernus ME, ... 62 5e-08
CP002278_872(CP002278|pid:none) Methanothermus fervidus DSM 2088... 61 6e-08
(P11250) RecName: Full=60S ribosomal protein L34; &R5RT34(S0427... 61 8e-08
BT038052_1(BT038052|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
HE575323_1059(HE575323|pid:none) Trypanosoma congolense IL3000 a... 60 2e-07
HE575324_928(HE575324|pid:none) Trypanosoma congolense IL3000 an... 60 2e-07
(O26137) RecName: Full=50S ribosomal protein L34e; &AE000666_29... 59 2e-07
(A6USC2) RecName: Full=50S ribosomal protein L34e; &CP000742_14... 59 3e-07
CP001140_1147(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 59 4e-07
CP001710_502(CP001710|pid:none) Methanothermobacter marburgensis... 59 4e-07
CP001939_862(CP001939|pid:none) Thermosphaera aggregans DSM 1148... 56 2e-06
CP002779_505(CP002779|pid:none) Pyrococcus yayanosii CH1, comple... 55 4e-06
CP002838_1685(CP002838|pid:none) Pyrolobus fumarii 1A, complete ... 55 4e-06
AM494972_398(AM494972|pid:none) Leishmania braziliensis chromoso... 54 9e-06
AM494955_142(AM494955|pid:none) Leishmania braziliensis chromoso... 54 9e-06
(A3DND2) RecName: Full=50S ribosomal protein L34e; &CP000575_10... 54 1e-05
FR799573_391(FR799573|pid:none) Leishmania mexicana MHOM/GT/2001... 54 1e-05
(Q5JJF7) RecName: Full=50S ribosomal protein L34e; &AP006878_15... 53 2e-05
(Q2NFY3) RecName: Full=50S ribosomal protein L34e; &CP000102_85... 53 2e-05
CP000816_1189(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 53 2e-05
(C5A259) RecName: Full=50S ribosomal protein L34e; &CP001398_19... 53 2e-05
CR954204_435(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 53 2e-05
AE017199_289(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 52 3e-05
CP002737_486(CP002737|pid:none) Methanotorris igneus Kol 5, comp... 52 3e-05
CP002098_171(CP002098|pid:none) Ignisphaera aggregans DSM 17230,... 52 3e-05
(P58026) RecName: Full=50S ribosomal protein L34e; &BA000002_68... 52 4e-05
(O74006) RecName: Full=50S ribosomal protein L34e; 52 5e-05
CP002792_665(CP002792|pid:none) Methanothermococcus okinawensis ... 51 6e-05
(A9A697) RecName: Full=50S ribosomal protein L34e; &CP000867_25... 51 8e-05
(A1RXV1) RecName: Full=50S ribosomal protein L34e; &CP000505_62... 50 1e-04
CP002051_1354(CP002051|pid:none) Staphylothermus hellenicus DSM ... 50 1e-04
AP008215_617(AP008215|pid:none) Oryza sativa (japonica cultivar-... 48 5e-04
EU116870_1(EU116870|pid:none) Sipunculus nudus putative ribosoma... 46 0.003
BT089999_1(BT089999|pid:none) Soybean clone JCVI-FLGm-3I16 unkno... 45 0.006
(O05981) RecName: Full=50S ribosomal protein L34e; &CP000077_53... 42 0.028
HM048318_1(HM048318|pid:none) Plasmodium vivax isolate R41 putat... 40 0.14
EU441821_1(EU441821|pid:none) Xenopus borealis clone RPL34.a rib... 40 0.18
(A3MV68) RecName: Full=50S ribosomal protein L34e; &CP000561_10... 37 1.2
EU999598_1(EU999598|pid:none) Pinus sylvestris isolate Poland_25... 37 1.6
AB007181_1(AB007181|pid:none) Homo sapiens gene for ribosomal pr... 37 1.6
CP001731_2808(CP001731|pid:none) Sulfolobus islandicus L.D.8.5, ... 36 2.0
CP000852_1296(CP000852|pid:none) Caldivirga maquilingensis IC-16... 35 4.5
(Q975K6) RecName: Full=50S ribosomal protein L34e; &BA000023_45... 35 5.9
>AY857448_1(AY857448|pid:none) Suberites domuncula L34 mRNA,
complete cds.
Length = 112
Score = 119 bits (299), Expect = 1e-25
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = +1
Query: 49 NATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYKNLPKSRRTVSRAYG 228
N T++ KTPGGRLVY YI K G VPRCG+C L+G+PA+RP + KNL K ++TVSRAYG
Sbjct: 18 NRTRVSKTPGGRLVYLYIKKRGSVPRCGDCKTKLSGLPAVRPIKLKNLSKPKKTVSRAYG 77
Query: 229 GSKCAKCVRNRIVRAFLIEEQK 294
G++C +C+R RI+RAFLIEEQK
Sbjct: 78 GARCHQCLRQRIIRAFLIEEQK 99
Score = 119 bits (299), Expect = 1e-25
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = +1
Query: 469 NATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYKNLPKSRRTVSRAYG 648
N T++ KTPGGRLVY YI K G VPRCG+C L+G+PA+RP + KNL K ++TVSRAYG
Sbjct: 18 NRTRVSKTPGGRLVYLYIKKRGSVPRCGDCKTKLSGLPAVRPIKLKNLSKPKKTVSRAYG 77
Query: 649 GSKCAKCVRNRIVRAFLIEEQK 714
G++C +C+R RI+RAFLIEEQK
Sbjct: 78 GARCHQCLRQRIIRAFLIEEQK 99
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,923,601,380
Number of extensions: 37621336
Number of successful extensions: 93797
Number of sequences better than 10.0: 181
Number of HSP's gapped: 93663
Number of HSP's successfully gapped: 362
Length of query: 269
Length of database: 1,732,582,204
Length adjustment: 130
Effective length of query: 139
Effective length of database: 1,037,184,514
Effective search space: 144168647446
Effective search space used: 144168647446
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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