Dictyostelium discoideum cDNA Clone VSI680

Sequence VSI680

CAAATTGAAT TAATAATATA AATACAATGG GTAACAGAGC ATTCAAATCA
CATCACGGTC ACTTTTTAAG CGCTGAAGGC GAAGCTGTAA AGACTCACCA
CGGTCATCAT GATCATCACA CCCATTTCCA CGTTGAAAAC CATGGTGGTA
AAGTTGCATT AAAGACCCAT TGCGGTAAAT ACCTTTCAAT TGGTGATCAT
AAACAAGTTT ACCTCTCACA CCACTTTACA CGGTGACCAC TCACTCTTCC
ACTTAGAACA TCATGGCGGT AAAGTCTCAA TCAAAGGTCA TCACCACCAC
TACATTTCCG CTGATCATCA TGGTCATGTT TCAACCAAAG AACACCACGA
TCACGACACC ACCTTTGAAG AAATTATTAT TTAAACTAAT TTTTTAATAC
CAATAAATTT AAAATGATGT TGTAAATAAA AAAAAAA--- -------

Translated Amino Acid Sequence VSI680

n*INNINTMGNRAFKSHHGHFLSAEGEAVKTHHGHHDHHTHFHVENHGGKVALKTHCGKY
LSIGDHKQVYLSHHFTR*pltlplrtswr*slnqrsspplhfr*sswscfnqrtprsrhh
l*rnyyln*ffntnkfkmml*ikk---

Homology VSI680 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSI680 (VSI680Q) /CSM/VS/VSI6-D/VSI680Q.Seq.d/                        846   0.0
VFG268 (VFG268Q) /CSM/VF/VFG2-C/VFG268Q.Seq.d/                        831   0.0
VFH455 (VFH455Q) /CSM/VF/VFH4-C/VFH455Q.Seq.d/                        829   0.0
VFC761 (VFC761Q) /CSM/VF/VFC7-C/VFC761Q.Seq.d/                        829   0.0
VHC269 (VHC269Q) /CSM/VH/VHC2-C/VHC269Q.Seq.d/                        825   0.0
SSJ630 (SSJ630Q) /CSM/SS/SSJ6-B/SSJ630Q.Seq.d/                        825   0.0
SSI213 (SSI213Q) /CSM/SS/SSI2-A/SSI213Q.Seq.d/                        825   0.0
VFE257 (VFE257Q) /CSM/VF/VFE2-C/VFE257Q.Seq.d/                        823   0.0
VHD583 (VHD583Q) /CSM/VH/VHD5-D/VHD583Q.Seq.d/                        805   0.0
VFA186 (VFA186Q) /CSM/VF/VFA1-D/VFA186Q.Seq.d/                        799   0.0

Homology VSI680 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU269077) Dictyostelium discoideum vegetative cDNA clone:VS...   733   0.0    1
(J04472) D.discoideum hisactophilin mRNA, complete cds.           448   0.0    2
(BJ412958) Dictyostelium discoideum cDNA clone:ddv13g18, 5' ...   448   0.0    2
(BJ419284) Dictyostelium discoideum cDNA clone:ddv35i18, 5' ...   448   0.0    2
(BJ413470) Dictyostelium discoideum cDNA clone:ddv15n14, 5' ...   446   0.0    2
(BJ412005) Dictyostelium discoideum cDNA clone:ddv6j15, 5' e...   446   0.0    2
(BJ431281) Dictyostelium discoideum cDNA clone:ddv13g18, 3' ...   442   0.0    2
(C90692) Dictyostelium discoideum slug cDNA, clone SSJ630.        442   0.0    2
(C90329) Dictyostelium discoideum slug cDNA, clone SSI213.        442   0.0    2
(BJ412684) Dictyostelium discoideum cDNA clone:ddv9a16, 5' e...   440   0.0    2

Homology VSI680 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF544403_1(AF544403|pid:none) Expression vector pNCO113-hisactop...   121   3e-51
(P13231) RecName: Full=Hisactophilin-1; AltName: Full=Histidine-...   121   3e-51
EF493211_1(EF493211|pid:none) Expression vector pNCO-HISACT-(C49...   121   4e-50
(P42526) RecName: Full=Hisactophilin-2; AltName: Full=Histidine-...   100   2e-40
AE016877_4531(AE016877|pid:none) Bacillus cereus ATCC 14579, com...    46   8e-04
AF238896_1(AF238896|pid:none) Bacillus anthracis isolate BA1015 ...    45   0.001
CP001215_4849(CP001215|pid:none) Bacillus anthracis str. CDC 684...    45   0.001
AF238893_1(AF238893|pid:none) Bacillus anthracis isolate VOLLUM ...    45   0.001
CP001746_4505(CP001746|pid:none) Bacillus cereus biovar anthraci...    44   0.003
AE014188_480(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    43   0.005

Homology VSI680 vs Genome