Homology VSI490 vs Protein

Query= VSI490 (VSI490Q) /CSM/VS/VSI4-D/VSI490Q.Seq.d/
         (860 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86IV5) RecName: Full=Countin-1; Flags: Precursor;  &AC116986_1...   335   e-110
AF140780_1(AF140780|pid:none) Dictyostelium discoideum countin g...   335   e-109
(Q86HV8) RecName: Full=Countin-3; Flags: Precursor;  &AB211530_1...   178   7e-51
(Q8WSR7) RecName: Full=Countin-2; Flags: Precursor;  &AB067573_1...   158   3e-37
(Q554K2) RecName: Full=Countin-like protein; Flags: Precursor;         93   7e-19
AC116956_1(AC116956|pid:none) Dictyostelium discoideum chromosom...    93   7e-19
CP000682_1469(CP000682|pid:none) Metallosphaera sedula DSM 5348,...    38   0.60
CP000269_2685(CP000269|pid:none) Janthinobacterium sp. Marseille...    37   1.8
CP002528_2423(CP002528|pid:none) Krokinobacter sp. 4H-3-7-5, com...    35   3.9
CP002158_1178(CP002158|pid:none) Fibrobacter succinogenes subsp....    35   3.9
AF082528_1(AF082528|pid:none) Entamoeba dispar strain SAW 142 po...    35   5.1
(Q24824) RecName: Full=Pore-forming peptide ameobapore B; AltNam...    35   5.1
CP001699_5290(CP001699|pid:none) Chitinophaga pinensis DSM 2588,...    35   5.1
AM398681_673(AM398681|pid:none) Flavobacterium psychrophilum JIP...    34   8.7

>(Q86IV5) RecName: Full=Countin-1; Flags: Precursor;
           &AC116986_112(AC116986|pid:none)
          Length = 258

 Score =  335 bits (859), Expect(2) = e-110
 Identities = 163/163 (100%), Positives = 163/163 (100%)
 Frame = +1

Query: 220 PGGQIVDTVCDLLCDYVGVDEFIKLISDVDPDPIYICEKISVCKTNDNAAASLDLVQINP 399
           PGGQIVDTVCDLLCDYVGVDEFIKLISDVDPDPIYICEKISVCKTNDNAAASLDLVQINP
Sbjct: 60  PGGQIVDTVCDLLCDYVGVDEFIKLISDVDPDPIYICEKISVCKTNDNAAASLDLVQINP 119

Query: 400 QNGTVGGTFTLSIAYTVTNTIATGQLAFNIIDPTGNAFGDAVLLVQQSPEQYTQQFQFQA 579
           QNGTVGGTFTLSIAYTVTNTIATGQLAFNIIDPTGNAFGDAVLLVQQSPEQYTQQFQFQA
Sbjct: 120 QNGTVGGTFTLSIAYTVTNTIATGQLAFNIIDPTGNAFGDAVLLVQQSPEQYTQQFQFQA 179

Query: 580 TPSEQESFPNGLYTVQALVCEGSCGSPHPNTYTLANGTTTFTI 708
           TPSEQESFPNGLYTVQALVCEGSCGSPHPNTYTLANGTTTFTI
Sbjct: 180 TPSEQESFPNGLYTVQALVCEGSCGSPHPNTYTLANGTTTFTI 222

 Score = 88.6 bits (218), Expect(2) = e-110
 Identities = 46/59 (77%), Positives = 46/59 (77%)
 Frame = +3

Query: 42  MNKLFSLILALFLVNSAVVSSLDSCSICVDFVGXXXXXXXXXXXXXGVIGTCGDLCSAV 218
           MNKLFSLILALFLVNSAVVSSLDSCSICVDFVG             GVIGTCGDLCSAV
Sbjct: 1   MNKLFSLILALFLVNSAVVSSLDSCSICVDFVGNSLNDLLNIILNSGVIGTCGDLCSAV 59

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,979,487,562
Number of extensions: 37628498
Number of successful extensions: 118220
Number of sequences better than 10.0: 14
Number of HSP's gapped: 117800
Number of HSP's successfully gapped: 19
Length of query: 286
Length of database: 1,732,582,204
Length adjustment: 130
Effective length of query: 156
Effective length of database: 1,037,184,514
Effective search space: 161800784184
Effective search space used: 161800784184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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