<List of Series> <Series: VSI4-D> <Clone: VSI490> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone VSI490
Dictyostelium discoideum cDNA Project Home
Sequence VSI490
CGCGTCCGCC AGNAATTGGT AGATATATAT ATATAATAAA AATGAATAAA
TTATTTTCAT TAATTTTAGC TTTATTCCTT GTCAACTCCG CTGTTGTCTC
TTCACTCGAC TCATGTAGTA TTTGTGTTGA TTTTGTTGGT AACTCACTCA
ATGATCTTTT AAATATTATC CTTAACTCTG GTGTTATTGG TACCTGTGGT
GATCTTTGCT CAGCTGTTNC CAGGTGGTCA AATTGTTGAT ACCGTTTGCG
ACTTATTATG CGATTATGTT GGCGTTGATG AATTTATTAA ACTCATTTCA
GATGTTGACC CAGATCCAAT TTACATTTGT GAAAAGATCA GTGTTTGCAA
AACCAACGAT AACGCAGCTG CTTCATTAGA TTTAGTTCAA ATTAACCCAC
AAAACGGTAC TGTCGGTGGA ACATTCACCC TCTCAATTGC TTACACTGTT
ACCAACACCA TCGCCACTGG TCAATTAGCT TTCAATATCA TCGATCCAAC
CGGTAATGCT TTTGGTGATG CCGTTTTATT AGTTCAACAA TCACCAGAAC
AATACACCCA ACAATTCCAA TTCCAAGCTA CCCCATCAGA ACAAGAATCA
TTCCCAAATG GTTTATACAC TGTCCAAGCT CTCGTTTGTG AAGGTTCATG
TGGTTCACCA CATCCAAACA CTTACACTCT TGCCAACGGT ACCACCACTT
TCACCATCTC TGGTGCTGAT TCTTCATCAA TGTCTGGTGC TGGTTCTTTC
TCTGGTTCTT CCCAATCAAC CCAAACTGGT GCCGCCTCTG GTTCAGGTTC
AGGTTTTGCT TTATTTTAAA AAAATACTTA TTAAAATAAA TATTTAATTT
ATAATTTTTA
Translated Amino Acid Sequence VSI490
<All Frames>
rvrqxlvdiyi**k*inyfh*f*lyslstpllslhsthvvfvlillvthsmif*ILSLTL
VLLVPVVIFAQLXPGGQIVDTVCDLLCDYVGVDEFIKLISDVDPDPIYICEKISVCKTND
NAAASLDLVQINPQNGTVGGTFTLSIAYTVTNTIATGQLAFNIIDPTGNAFGDAVLLVQQ
SPEQYTQQFQFQATPSEQESFPNGLYTVQALVCEGSCGSPHPNTYTLANGTTTFTISGAD
SSSMSGAGSFSGSSQSTQTGAASGSGSGFALF*knty*nkyliynf
Homology VSI490 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
VSI490 (VSI490Q) /CSM/VS/VSI4-D/VSI490Q.Seq.d/ 1516 0.0
VSF151 (VSF151Q) /CSM/VS/VSF1-C/VSF151Q.Seq.d/ 1493 0.0
FC-AA21 (FC-AA21Q) /CSM/FC/FC-AA/FC-AA21Q.Seq.d/ 1481 0.0
FC-020 (FC-020Q) /CSM/CG/CG-FC/FC-020Q.Seq.d/ 1481 0.0
SLE884 (SLE884Q) /CSM/SL/SLE8-D/SLE884Q.Seq.d/ 1455 0.0
VSJ484 (VSJ484Q) /CSM/VS/VSJ4-D/VSJ484Q.Seq.d/ 1451 0.0
VSF843 (VSF843Q) /CSM/VS/VSF8-B/VSF843Q.Seq.d/ 1441 0.0
SSD491 (SSD491Q) /CSM/SS/SSD4-D/SSD491Q.Seq.d/ 1435 0.0
VSC485 (VSC485Q) /CSM/VS/VSC4-D/VSC485Q.Seq.d/ 1168 0.0
FC-BO02 (FC-BO02Q) /CSM/FC/FC-BO/FC-BO02Q.Seq.d/ 1114 0.0
Homology VSI490 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AU268777) Dictyostelium discoideum vegetative cDNA clone:VS... 1178 0.0 1
(AF140780) Dictyostelium discoideum countin gene, complete cds. 1158 0.0 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 1158 0.0 2
(AU262596) Dictyostelium discoideum vegetative cDNA clone:VS... 1158 0.0 1
(C23640) Dictyostelium discoideum gamete cDNA, clone FC-AA21. 1158 0.0 2
(AU284873) Dictyostelium discoideum gamete cDNA clone:FC-BO0... 1114 0.0 1
(AU061624) Dictyostelium discoideum slug cDNA, clone SLE884. 1078 0.0 2
(AU264786) Dictyostelium discoideum vegetative cDNA clone:VS... 1021 0.0 2
(AU265880) Dictyostelium discoideum vegetative cDNA clone:VS... 771 0.0 4
(AU269995) Dictyostelium discoideum vegetative cDNA clone:VS... 1025 0.0 2
Homology VSI490 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q86IV5) RecName: Full=Countin-1; Flags: Precursor; &AC116986_1... 335 e-110
AF140780_1(AF140780|pid:none) Dictyostelium discoideum countin g... 335 e-109
(Q86HV8) RecName: Full=Countin-3; Flags: Precursor; &AB211530_1... 178 7e-51
(Q8WSR7) RecName: Full=Countin-2; Flags: Precursor; &AB067573_1... 158 3e-37
(Q554K2) RecName: Full=Countin-like protein; Flags: Precursor; 93 7e-19
AC116956_1(AC116956|pid:none) Dictyostelium discoideum chromosom... 93 7e-19
CP000682_1469(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 38 0.58
CP000269_2685(CP000269|pid:none) Janthinobacterium sp. Marseille... 37 1.7
CP002528_2423(CP002528|pid:none) Krokinobacter sp. 4H-3-7-5, com... 35 3.7
CP002158_1178(CP002158|pid:none) Fibrobacter succinogenes subsp.... 35 3.7
Homology VSI490 vs Genome
<more Genome info>
<List of Series> <Series: VSI4-D> <Clone: VSI490> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home