Homology VSH714 vs Protein

Query= VSH714 (VSH714Q) /CSM/VS/VSH7-A/VSH714Q.Seq.d/
         (431 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02291_1(U02291|pid:none) Dictyostelium discoideum mitochondrial...   107   2e-22
(Q2LCP4) RecName: Full=Uncharacterized mitochondrial protein Mp3...    84   2e-15

>U02291_1(U02291|pid:none) Dictyostelium discoideum mitochondrial
           NADH:ubiquinone oxidoreductase 80 kDa subunit gene,
           complete cds and chain 5 gene, partial cds.
          Length = 104

 Score =  107 bits (268), Expect = 2e-22
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = +1

Query: 13  KAQIKYNVLDIEIRKPGFHSIINTILYKLWYIYEDQGLLXMXKFTKNKAHGSM 171
           KAQIKYNVLDIEIRKPGFHSIINTILYKLWYIYEDQGLL M KFTKNKAHGSM
Sbjct: 44  KAQIKYNVLDIEIRKPGFHSIINTILYKLWYIYEDQGLLRMYKFTKNKAHGSM 96

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 770,334,534
Number of extensions: 10993725
Number of successful extensions: 16425
Number of sequences better than 10.0: 2
Number of HSP's gapped: 16417
Number of HSP's successfully gapped: 2
Length of query: 143
Length of database: 1,732,582,204
Length adjustment: 106
Effective length of query: 37
Effective length of database: 1,165,565,626
Effective search space: 43125928162
Effective search space used: 43125928162
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)




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