Dictyostelium discoideum cDNA Clone VSH672

Sequence VSH672

GCTGTAGGTG TTGGTTGTTC TGCAAATGAT GATCTCACTG TTGATGGTGC
CGCTTTATGG TTAAAATCAA TTCCAGCAGA TAAAAGAGCT TTAGTTTATT
ATACAACTAC TCAATATAGT ACTGGTTCTT TAATTAATTA TTGTAATTTG
GCTTCCAATG CAGTCTTAGA ATGGCCAAAT GATGGTGTTG TTGATAATGA
GCATACTCCA CTCGAAGGTG GTGTATATTT AAATAACTTT AAAGACTGGT
GTCACTCTGA TGGTATGCAC TCACCACAAC AAACTACAAA TACTGAATAT
AACAAAGAAA TGAGTTCCAA CTCTGTTTGG TAAACTACTT TGTATTATTT
TTTTTTCTCT ACAATAATTG TAATAAAATC GATTTATATT AAATTTATTG
TCACTTTATA ATTAAAAAAA AAA------- ---GCTGTAG GTGTTGGTTG
TTCTGCAAAT GATGATCTCA CTGTTGATGG TGCCGCTTTA TGGTTAAAAT
CAATTCCAGC AGATAAAAGA GCTTTAGTTT ATTATACAAC TACTCAATAT
AGTACTGGTT CTTTAATTAA TTATTGTAAT TTGGCTTCCA ATGCAGTCTT
AGAATGGCCA AATGATGGTG TTGTTGATAA TGAGCATACT CCACTCGAAG
GTGGTGTATA TTTAAATAAC TTTAAAGACT GGTGTCACTC TGATGGTATG
CACTCACCAC AACAAACTAC AAATACTGAA TATAACAAAG AAATGAGTTC
CAACTCTGTT TGGTAAACTA CTTTGTATTA TTTTTTTTTC TCTACAATAA
TTGTAATAAA ATCGATTTAT ATTAAATTTA TTGTCACTTT A

Translated Amino Acid Sequence VSH672

crcwlfck**shc*wcrfmvkinssr*ksfsllynysi*ywffn*ll*fgfqcslrmak*
wcc***aystrrwcifk*l*rlvsl*wyaltttnyky*i*qrnefqlclvnyfvlfffly
nncnkidly*IYCHFIIKKK---

---AVGVGCSANDDLTVDGAALWLKSIPADKRALVYYTTTQYSTGSLINYCNLASNAVLE
WPNDGVVDNEHTPLEGGVYLNNFKDWCHSDGMHSPQQTTNTEYNKEMSSNSVW*ttlyyf
ffstiiviksiyikfivtl

Homology VSH672 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSK240 (VSK240Q) /CSM/VS/VSK2-B/VSK240Q.Seq.d/                        765   0.0
VSJ105 (VSJ105Q) /CSM/VS/VSJ1-A/VSJ105Q.Seq.d/                        765   0.0
VSH672 (VSH672Q) /CSM/VS/VSH6-C/VSH672Q.Seq.d/                        765   0.0
VSE772 (VSE772Q) /CSM/VS/VSE7-C/VSE772Q.Seq.d/                        755   0.0
VHQ437 (VHQ437Q) /CSM/VH/VHQ4-B/VHQ437Q.Seq.d/                        755   0.0
VHP806 (VHP806Q) /CSM/VH/VHP8-A/VHP806Q.Seq.d/                        755   0.0
VHP701 (VHP701Q) /CSM/VH/VHP7-A/VHP701Q.Seq.d/                        755   0.0
VHP580 (VHP580Q) /CSM/VH/VHP5-D/VHP580Q.Seq.d/                        755   0.0
VHP430 (VHP430Q) /CSM/VH/VHP4-B/VHP430Q.Seq.d/                        755   0.0
VHO841 (VHO841Q) /CSM/VH/VHO8-B/VHO841Q.Seq.d/                        755   0.0

Homology VSH672 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU270861) Dictyostelium discoideum vegetative cDNA clone:VS...   688   0.0    2
(AU269411) Dictyostelium discoideum vegetative cDNA clone:VS...   688   0.0    2
(AU267804) Dictyostelium discoideum vegetative cDNA clone:VS...   688   0.0    2
(BJ445671) Dictyostelium discoideum cDNA clone:ddv60b12, 3' ...   688   0.0    2
(BJ437146) Dictyostelium discoideum cDNA clone:ddv33h12, 3' ...   688   0.0    2
(BJ445677) Dictyostelium discoideum cDNA clone:ddv60c12, 3' ...   688   0.0    2
(BJ446642) Dictyostelium discoideum cDNA clone:ddv63j10, 3' ...   688   0.0    2
(BJ437032) Dictyostelium discoideum cDNA clone:ddv33a04, 3' ...   688   0.0    2
(BJ446509) Dictyostelium discoideum cDNA clone:ddv62o19, 3' ...   688   0.0    2
(BJ446204) Dictyostelium discoideum cDNA clone:ddv62b01, 3' ...   688   0.0    2

Homology VSH672 vs Protein

Sequences producing significant alignments:                      (bits) Value


AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...    93   2e-17
CP002789_4122(CP002789|pid:none) Xanthomonas campestris pv. raph...    91   6e-17
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...    91   6e-17
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...    91   6e-17
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...    90   1e-16

Homology VSH672 vs Genome