Dictyostelium discoideum cDNA Clone VSG602

Sequence VSG602

GAATTCGAAC TCCGTGCCCG TAACTTCTCA ACCCAAGGTT CATTTGGTTT
TGGTATCCAA GAACACATCG ATTTAGGTAT TAAATACGAT CCATCAATCG
GTATTTACGG TATGGATTTC TTCGTCGTAC TTTCACGTCC AGGTTTCCGT
GTTGCTCACA AAAAGAGAGC CGGTGCTAAA GTTGGTTTCC AACATAAAAT
CGGTAAAGAA GATGCCGTTA ACTGGTTCAA AACCACTTAT GATGGTATTG
TTATTGGTGG AAAGAAATAA ACAATTGTTC ACACATAAAT TATAAAAACT
ATAAAAAAAA AA-------- --

Translated Amino Acid Sequence VSG602

EFELRARNFSTQGSFGFGIQEHIDLGIKYDPSIGIYGMDFFVVLSRPGFRVAHKKRAGAK
VGFQHKIGKEDAVNWFKTTYDGIVIGGKK*tivht*iiktikk---

Homology VSG602 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSG602 (VSG602Q) /CSM/VS/VSG6-A/VSG602Q.Seq.d/                        599   e-170
FC-AG19 (FC-AG19Q) /CSM/FC/FC-AG/FC-AG19Q.Seq.d/                      599   e-170
FC-AE20 (FC-AE20Q) /CSM/FC/FC-AE/FC-AE20Q.Seq.d/                      599   e-170
FC-AR12 (FC-AR12Q) /CSM/FC/FC-AR/FC-AR12Q.Seq.d/                      595   e-169
FC-BL21 (FC-BL21Q) /CSM/FC/FC-BL/FC-BL21Q.Seq.d/                      583   e-166
VHC468 (VHC468Q) /CSM/VH/VHC4-C/VHC468Q.Seq.d/                        567   e-161
VHH863 (VHH863Q) /CSM/VH/VHH8-C/VHH863Q.Seq.d/                        519   e-147
VFF502 (VFF502Q) /CSM/VF/VFF5-A/VFF502Q.Seq.d/                        504   e-142
VFA578 (VFA578Q) /CSM/VF/VFA5-D/VFA578Q.Seq.d/                        442   e-123
FC-IC0915 (FC-IC0915Q) /CSM/FC-IC/FC-IC0915Q.Seq.d/                   343   1e-93

Homology VSG602 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU284272) Dictyostelium discoideum gamete cDNA clone:FC-AG1...   599   e-167  1
(AU284260) Dictyostelium discoideum gamete cDNA clone:FC-AE2...   599   e-167  1
(AU266653) Dictyostelium discoideum vegetative cDNA clone:VS...   599   e-167  1
(AU284392) Dictyostelium discoideum gamete cDNA clone:FC-AR1...   595   e-166  1
(AU284813) Dictyostelium discoideum gamete cDNA clone:FC-BL2...   583   e-162  1
(BJ419279) Dictyostelium discoideum cDNA clone:ddv35h18, 5' ...   567   e-157  1
(BJ437859) Dictyostelium discoideum cDNA clone:ddv35h18, 3' ...   509   e-140  1
(BJ441431) Dictyostelium discoideum cDNA clone:ddv46n16, 3' ...   440   e-139  3
(BJ428455) Dictyostelium discoideum cDNA clone:ddv12c01, 3' ...   464   e-135  3
(BJ429264) Dictyostelium discoideum cDNA clone:ddv2k19, 3' e...   432   e-120  2

Homology VSG602 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P16168) RecName: Full=60S ribosomal protein L11; AltName: Full=...   182   4e-45
AK340094_1(AK340094|pid:none) Acyrthosiphon pisum ACYPI008302 mR...   139   5e-32
AK339843_1(AK339843|pid:none) Acyrthosiphon pisum ACYPI004755 mR...   139   5e-32
BT127135_1(BT127135|pid:none) Dendroctonus ponderosae clone DPO0...   137   1e-31
EZ419774_1(EZ419774|pid:none) TSA: Cimex lectularius CL-4-24-44 ...   137   1e-31
AM049026_1(AM049026|pid:none) Curculio glandium mRNA for ribosom...   137   3e-31
EU045352_1(EU045352|pid:none) Phlebotomus papatasi 60S ribosomal...   137   3e-31
JF264996_1(JF264996|pid:none) Heliconius melpomene cythera ribos...   136   3e-31
EF121958_1(EF121958|pid:none) Blatta orientalis ribosomal protei...   135   7e-31
EF639091_1(EF639091|pid:none) Triatoma infestans clone tin-445 r...   135   1e-30

Homology VSG602 vs Genome