Dictyostelium discoideum cDNA Clone VSG488

Sequence VSG488

CAAAGTAGAT CCAAGCGAAA AAGTTGAAGT CTTCCTCAGA GTATGTGGTG
GTGAAGCTGG TGCTATGTCC ACCCTTGCAC CAAAACTCGG TCCACTCGGT
GTTTCACCAA AGAAAGTTGG TGATGATATC GCTAAAGCCA CTCAACCATG
GAAAGGTATG AAGGTTTCAG TCAAATTGAC CATTCAAAAT CGTATTGCTG
TCCCAGAAGT TTTACCATCT GCTTCAGCAT TGGTCATCAA AGCCTTAAAA
GAGCCACCAA GAGACAGAAA GAAGGAAAAG AACATTAAAC ACAACGGTAA
CATCCCATTA GAAGAAATCT GCAAAATCGC CAAGACCATG AGATTCAAAT
CTTTAGCTGT TGACTTCAAA GGTTCAGTCT TAGAAATCTT AGGTACTGCT
CACTCTGT-- --------CA AAAGTAGATC CAAGCGAAAA AGTTGAAGTC
TTCCTCAGAG TATGTGGTGG TGAAGCTGGT GCTATGTCCA CCCTTGCACC
AAAACTCGGT CCACTCGGTG TTTCACCAAA GAAAGTTGGT GATGATATCG
CTAAAGCCAC TCAACCATGG AAAGGTATGA AGGTTTCAGT CAAATTGACC
ATTCAAAATC GTATTGCTGT CCCAGAAGTT TTACCATCTG CTTCAGCATT
GGTCATCAAA GCCTTAAAAG AGCCACCAAG AGACAGAAAG AAGGAAAAGA
ACATTAAACA CAACGGTAAC ATCCCATTAG AAGAAATCTG CAAAATCGCC
AAGACCATGA GATTCAAATC TTTAGCTGTT GACTTCAAAG GTTCAGTCTT
AGAAATCTTA GGTACTGCTC ACTCTGTTGG TTGTAAAGTC AATGGTAAAT
CACCAAGAGA TATCCAAGCT GGTATCCAAT CTGGTGAAAT CGAAGTTGTC
GAACCAAAAT AAACTATTTA AACTCAAAAT TTTAAATATA A

Translated Amino Acid Sequence VSG488

KVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSVKLT
IQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLAV
DFKGSVLEILGTAHS---

---KVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSV
KLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKS
LAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEVVEPK*ti*tqnfky

Homology VSG488 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSG488 (VSG488Q) /CSM/VS/VSG4-D/VSG488Q.Seq.d/                       1806   0.0
VSF609 (VSF609Q) /CSM/VS/VSF6-A/VSF609Q.Seq.d/                       1037   0.0
VSE323 (VSE323Q) /CSM/VS/VSE3-A/VSE323Q.Seq.d/                       1037   0.0
VSD274 (VSD274Q) /CSM/VS/VSD2-D/VSD274Q.Seq.d/                       1037   0.0
VSC418 (VSC418Q) /CSM/VS/VSC4-A/VSC418Q.Seq.d/                       1037   0.0
VSA827 (VSA827Q) /CSM/VS/VSA8-B/VSA827Q.Seq.d/                       1037   0.0
VSA624 (VSA624Q) /CSM/VS/VSA6-A/VSA624Q.Seq.d/                       1037   0.0
VSA263 (VSA263Q) /CSM/VS/VSA2-C/VSA263Q.Seq.d/                       1037   0.0
VSA661 (VSA661Q) /CSM/VS/VSA6-C/VSA661Q.Seq.d/                       1035   0.0
VSB570 (VSB570Q) /CSM/VS/VSB5-C/VSB570Q.Seq.d/                       1033   0.0

Homology VSG488 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU266565) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU265495) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU263760) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU263021) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU262549) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU261767) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU261610) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU261386) Dictyostelium discoideum vegetative cDNA clone:VS...  1037   0.0    1
(AU261641) Dictyostelium discoideum vegetative cDNA clone:VS...  1035   0.0    1
(AU262103) Dictyostelium discoideum vegetative cDNA clone:VS...  1033   0.0    1

Homology VSG488 vs Protein

Sequences producing significant alignments:                      (bits) Value


FQ790332_71(FQ790332|pid:none) Botryotinia fuckeliana isolate T4...   216   1e-54
FQ311442_307(FQ311442|pid:none) Sporisorium reilianum SRZ2 chrom...   214   4e-54
AK340119_1(AK340119|pid:none) Acyrthosiphon pisum ACYPI000059 mR...   214   4e-54
AE017343_705(AE017343|pid:none) Cryptococcus neoformans var. neo...   213   9e-54
AP007151_660(AP007151|pid:none) Aspergillus oryzae RIB40 DNA, SC...   213   1e-53
AM269963_31(AM269963|pid:none) Aspergillus niger contig An01c016...   213   1e-53
GU395280_1(GU395280|pid:none) Magnaporthe oryzae clone F595 prob...   213   2e-53
CR761927_1(CR761927|pid:none) Xenopus tropicalis finished cDNA, ...   211   4e-53
BC041240_1(BC041240|pid:none) Xenopus laevis ribosomal protein L...   211   5e-53
CP003003_373(CP003003|pid:none) Myceliophthora thermophila ATCC ...   211   6e-53

Homology VSG488 vs Genome