Dictyostelium discoideum cDNA Clone VSG340

Sequence VSG340

TCCAAAGTAG ATCCAAGCGA AAAAGTTGAA GTCTTCCTCA GAGTATGTGG
TGGTGAAGCT GGTGCTATGT CCACCCTTGC ACCAAAACTC GGTCCACTCG
GTGTTTCACC AAAGAAAGTT GGTGATGATA TCGCTAAAGC CACTCAACCA
TGGAAAGGTA TGAAGGTTTC AGTCAAATTG ACCATTCAAA ATCGTATTGC
TGTCCCAGAA GTTTTACCAT CTGCTTCAGC ATTGGTCATC AAAGCCTTAA
AAGAGCCACC AAGAGACAGA AAGAAGGAAA AGAACATTAA ACACAACGGT
AACATCCCAT TAGAAGAAAT CTGCAAAATC GCCAAGACCA TGAGATTCAA
ATCTTTAGCT GTTGACTTCA AAGGTTCAGT CTTAGAAATC TTAGGTACTG
CTCACTCTGT TGGTTGTAAA GTCAATGGTA AATCACCAAG AGATATCCAA
GCTGGTATCC AATCTGGTGA AATTCGAAGT TGTCGAACCA AAATAAACTA
TTTAAACTCA AAATTTTAAA TATAAATATA ATTTTTTTTT TTTTTT----
------

Translated Amino Acid Sequence VSG340

SKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSVKL
TIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLA
VDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIRSCRTKINYLNSKF*i*i*fff
f---

Homology VSG340 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSG340 (VSG340Q) /CSM/VS/VSG3-B/VSG340Q.Seq.d/                       1053   0.0
VSF609 (VSF609Q) /CSM/VS/VSF6-A/VSF609Q.Seq.d/                       1031   0.0
VSD274 (VSD274Q) /CSM/VS/VSD2-D/VSD274Q.Seq.d/                       1031   0.0
VSC418 (VSC418Q) /CSM/VS/VSC4-A/VSC418Q.Seq.d/                       1029   0.0
VSA263 (VSA263Q) /CSM/VS/VSA2-C/VSA263Q.Seq.d/                       1025   0.0
VSE323 (VSE323Q) /CSM/VS/VSE3-A/VSE323Q.Seq.d/                       1021   0.0
VSA827 (VSA827Q) /CSM/VS/VSA8-B/VSA827Q.Seq.d/                       1021   0.0
VSA624 (VSA624Q) /CSM/VS/VSA6-A/VSA624Q.Seq.d/                       1021   0.0
VSG488 (VSG488Q) /CSM/VS/VSG4-D/VSG488Q.Seq.d/                       1019   0.0
VSA661 (VSA661Q) /CSM/VS/VSA6-C/VSA661Q.Seq.d/                       1017   0.0

Homology VSG340 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU266333) Dictyostelium discoideum vegetative cDNA clone:VS...  1053   0.0    1
(AU265495) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU263760) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU262549) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU261386) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU263021) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU261610) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU261767) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU266565) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2
(AU261641) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    2

Homology VSG340 vs Protein

Sequences producing significant alignments:                      (bits) Value


AK340119_1(AK340119|pid:none) Acyrthosiphon pisum ACYPI000059 mR...   213   4e-54
AE017343_705(AE017343|pid:none) Cryptococcus neoformans var. neo...   213   5e-54
FQ311442_307(FQ311442|pid:none) Sporisorium reilianum SRZ2 chrom...   211   1e-53
AP007151_660(AP007151|pid:none) Aspergillus oryzae RIB40 DNA, SC...   211   2e-53
AM269963_31(AM269963|pid:none) Aspergillus niger contig An01c016...   211   2e-53
CR761927_1(CR761927|pid:none) Xenopus tropicalis finished cDNA, ...   209   4e-53
GU395280_1(GU395280|pid:none) Magnaporthe oryzae clone F595 prob...   209   4e-53
BC041240_1(BC041240|pid:none) Xenopus laevis ribosomal protein L...   209   6e-53
AM920428_319(AM920428|pid:none) Penicillium chrysogenum Wisconsi...   206   4e-52
AK167761_1(AK167761|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK...   206   4e-52

Homology VSG340 vs Genome