Dictyostelium discoideum cDNA Clone VSG334

Sequence VSG334

AAGCATTAAA TGCTGGTAAA CCACAAGATG CTTTAAATGT AGCCTTAGCT
GATCCACCAA TTTACACTAA AACAGGTGCA ATCAAGGATC AAAATGCAAC
CATTGTCCTC AATCTTTTAG GTAGTTTTAA AGATAAAGAT GTTGAAACAT
CAGTCGAAAC ACTCAACGAT GACCAACTCG ATATTTTAAT GAAATATGTC
TACCGTGGTC TTGCTACCGG TGAAAATTCA CCAATCTTTT TCAAATGGCA
CGAATGTGTC CTCAAGAAGG GTGGTGCTGG TACAATCATT AGAGTTATCT
CTGAAAAGAA AACTGTTTAA GCAATTATCA ATCCGAATCT GTAACCATTA
AAAAATAGAT TTCTATTTAT TAAAAAAAAA A--------- -AAAAGAAGT
AACCAAAGCA TTAAATGCTG GTAAACCACA AGATGCTTTA AATGTAGCCT
TAGCTGATCC ACCAATTTAC ACTAAAACAG GTGCAATCAA GGATCAAAAT
GCAACCATTG TCCTCAATCT TTTAGGTAGT TTTAAAGATA AAGATGTTGA
AACATCAGTC GAAACACTCA ACGATGACCA ACTCGATATT TTAATGAAAT
ATGTCT

Translated Amino Acid Sequence VSG334

alnagkpqdalnvaladppiytktgaikdqnativlnllgsfkdkdvetsvetlnddqld
ilmkyvyrglatgenspiffkwhecvlkkggagtiirvisekktv*aiinpnl*PLKNRF
LFIKKK---

---KEVTKALNAGKPQDALNVALADPPIYTKTGAIKDQNATIVLNLLGSFKDKDVETSVE
TLNDDQLDILMKYV

Homology VSG334 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSJ381 (VSJ381Q) /CSM/VS/VSJ3-D/VSJ381Q.Seq.d/                        735   0.0
VSG334 (VSG334Q) /CSM/VS/VSG3-B/VSG334Q.Seq.d/                        735   0.0
SSL655 (SSL655Q) /CSM/SS/SSL6-C/SSL655Q.Seq.d/                        735   0.0
SSH791 (SSH791Q) /CSM/SS/SSH7-D/SSH791Q.Seq.d/                        735   0.0
SSG116 (SSG116Q) /CSM/SS/SSG1-A/SSG116Q.Seq.d/                        735   0.0
VSG195 (VSG195Q) /CSM/VS/VSG1-D/VSG195Q.Seq.d/                        714   0.0
FC-IC0077 (FC-IC0077Q) /CSM/FC-IC/FC-IC0077Q.Seq.d/                   557   e-158
VSE765 (VSE765Q) /CSM/VS/VSE7-C/VSE765Q.Seq.d/                         42   0.010
VSE760 (VSE760Q) /CSM/VS/VSE7-C/VSE760Q.Seq.d/                         42   0.010
SSE728 (SSE728Q) /CSM/SS/SSE7-B/SSE728Q.Seq.d/                         42   0.010

Homology VSG334 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF095934) Dictyostelium discoideum p16-Arc (arcE) mRNA, com...   735   0.0    1
(AU269836) Dictyostelium discoideum vegetative cDNA clone:VS...   735   0.0    1
(AU266325) Dictyostelium discoideum vegetative cDNA clone:VS...   735   0.0    1
(C93731) Dictyostelium discoideum slug cDNA, clone SSL655.        735   0.0    1
(C90030) Dictyostelium discoideum slug cDNA, clone SSG116.        735   0.0    1
(AU266111) Dictyostelium discoideum vegetative cDNA clone:VS...   714   0.0    1
(AU269837) Dictyostelium discoideum vegetative cDNA clone:VS...   700   0.0    1
(AU038497) Dictyostelium discoideum slug cDNA, clone SSH791.      599   e-167  1
(AU271334) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   557   e-154  1
(AU266326) Dictyostelium discoideum vegetative cDNA clone:VS...   426   e-115  1

Homology VSG334 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O96626) RecName: Full=Actin-related protein 2/3 complex subunit...   211   2e-53
DQ985458_1(DQ985458|pid:none) Suberites domuncula actin related ...    98   3e-19
AK150443_1(AK150443|pid:none) Mus musculus bone marrow macrophag...    94   4e-18
BC162200_1(BC162200|pid:none) Danio rerio si:dkeyp-15f12.2, mRNA...    94   5e-18
JI173835_1(JI173835|pid:none) TSA: Ascaris suum ASCF_6573_1314 m...    94   5e-18
AJ719279_1(AJ719279|pid:none) Gallus gallus mRNA for hypothetica...    93   8e-18
AX239567_1(AX239567|pid:none) Sequence 10 from Patent WO0164874.       91   3e-17
AK008097_1(AK008097|pid:none) Mus musculus adult male small inte...    91   3e-17
AK166919_1(AK166919|pid:none) Mus musculus blastocyst blastocyst...    91   5e-17
BC044413_1(BC044413|pid:none) Danio rerio actin related protein ...    91   5e-17

Homology VSG334 vs Genome