Homology VSF764 vs Protein
Query= VSF764 (VSF764Q) /CSM/VS/VSF7-C/VSF764Q.Seq.d/
(764 letters)
Database: nrp_B
3,019,103 sequences; 979,498,206 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P11874) RecName: Full=60S ribosomal protein L7; &R5DO7(S04849;... 321 e-120
AC114263_33(AC114263|pid:none) Dictyostelium discoideum chromoso... 310 e-117
AY961584_1(AY961584|pid:none) Lysiphlebus testaceipes ribosomal ... 186 5e-63
DQ084481_1(DQ084481|pid:none) Chaetomium globosum 60S ribosomal ... 186 5e-62
EF408834_1(EF408834|pid:none) Poecilia reticulata ribosomal prot... 171 5e-62
BT043873_1(BT043873|pid:none) Salmo salar clone HM4_1876 ribosom... 170 1e-61
AF175983_1(AF175983|pid:none) Rana sylvatica ribosomal protein L... 174 1e-61
BT045943_1(BT045943|pid:none) Salmo salar clone ssal-rgf-537-123... 169 3e-61
BT058322_1(BT058322|pid:none) Salmo salar clone Contig3815 60S r... 170 2e-60
EF087518_1(EF087518|pid:none) Picea sitchensis clone WS02742_E02... 175 5e-60
AY561515_1(AY561515|pid:none) Danio rerio ribosomal protein L7 (... 165 6e-60
AY857418_1(AY857418|pid:none) Suberites domuncula L7 mRNA, compl... 172 8e-60
BC107515_1(BC107515|pid:none) Danio rerio ribosomal protein L7, ... 164 8e-60
BC154759_1(BC154759|pid:none) Danio rerio ribosomal protein L7, ... 164 1e-59
CU633900_1028(CU633900|pid:none) Podospora anserina genomic DNA ... 178 2e-59
BC085590_1(BC085590|pid:none) Danio rerio ribosomal protein L7, ... 163 2e-59
(Q5ZJ56) RecName: Full=60S ribosomal protein L7; &AJ720578_1(AJ... 166 5e-59
BT040553_1(BT040553|pid:none) Zea mays full-length cDNA clone ZM... 166 7e-59
(P60040) RecName: Full=60S ribosomal protein L7-2; &AC006200_12... 167 7e-59
DQ066291_1(DQ066291|pid:none) Ixodes scapularis isolate is-all-3... 171 9e-59
DQ216875_1(DQ216875|pid:none) Taeniopygia guttata clone 0058P000... 165 9e-59
EU124957_1(EU124957|pid:none) Arenicola marina ribosomal protein... 174 9e-59
EU558355_1(EU558355|pid:none) Phoronis muelleri putative 60S rib... 173 1e-58
(O01802) RecName: Full=60S ribosomal protein L7; &AF003139_2(AF... 168 3e-58
AK150943_1(AK150943|pid:none) Mus musculus bone marrow macrophag... 160 6e-58
(P14148) RecName: Full=60S ribosomal protein L7; &AK050656_1(AK... 160 9e-58
(P05426) RecName: Full=60S ribosomal protein L7; &R5RTL7(JC4230... 160 9e-58
BC159431_1(BC159431|pid:none) Rattus norvegicus ribosomal protei... 160 9e-58
A37055(A37055;S30214;S30215) ribosomal protein L7, cytosolic - m... 160 3e-57
(Q58DT1) RecName: Full=60S ribosomal protein L7; &BT021516_1(BT... 158 3e-57
(Q5R9R4) RecName: Full=60S ribosomal protein L7; &CR859318_1(CR... 158 3e-57
AJ557884_1(AJ557884|pid:none) Crassostrea gigas partial mRNA for... 175 3e-57
AK167124_1(AK167124|pid:none) Mus musculus blastocyst blastocyst... 158 4e-57
L16558_1(L16558|pid:none) Human ribosomal protein L7 (RPL7) mRNA... 158 4e-57
AC004005_26(AC004005|pid:none) Arabidopsis thaliana chromosome 2... 160 4e-57
BT002379_1(BT002379|pid:none) Arabidopsis thaliana Unknown prote... 160 5e-57
BT039191_1(BT039191|pid:none) Zea mays full-length cDNA clone ZM... 160 5e-57
BC106056_1(BC106056|pid:none) Homo sapiens ribosomal protein L7,... 157 6e-57
(P18124) RecName: Full=60S ribosomal protein L7; &AK291119_1(AK... 157 6e-57
BT033439_1(BT033439|pid:none) Zea mays full-length cDNA clone ZM... 159 6e-57
M85235_1(M85235|pid:none) Mus musculus ribosomal protein mRNA, c... 157 8e-57
BT040051_1(BT040051|pid:none) Zea mays full-length cDNA clone ZM... 159 1e-56
AM270311_17(AM270311|pid:none) Aspergillus niger contig An14c003... 166 2e-56
EF677455_1(EF677455|pid:none) Picea sitchensis clone WS02769_C08... 167 2e-56
EF147502_1(EF147502|pid:none) Populus trichocarpa clone WS01231_... 158 2e-56
AY735454_1(AY735454|pid:none) Sus scrofa ribosomal protein L7 mR... 158 2e-56
FJ362379_1(FJ362379|pid:none) Caenorhabditis sp. PS1010 contig J... 160 2e-56
AE017341_626(AE017341|pid:none) Cryptococcus neoformans var. neo... 166 3e-56
M17422_1(M17422|pid:none) Rat ribosomal protein L7 mRNA, 5' end. 160 4e-56
X57959_1(X57959|pid:none) H.sapiens mRNA for ribosomal protein L7. 154 4e-56
CR456773_1(CR456773|pid:none) Homo sapiens full open reading fra... 157 5e-56
AK073472_1(AK073472|pid:none) Oryza sativa Japonica Group cDNA c... 156 5e-56
DQ228335_1(DQ228335|pid:none) Solanum tuberosum clone 145F05 tha... 155 1e-55
EF144970_1(EF144970|pid:none) Populus trichocarpa clone WS0111_D... 157 2e-55
AY389940_1(AY389940|pid:none) Protopterus dolloi ribosomal prote... 165 2e-55
EF146743_1(EF146743|pid:none) Populus trichocarpa clone WS01213_... 154 2e-55
AY846828_1(AY846828|pid:none) Triticum aestivum ribosomal protei... 152 5e-55
AC005058_2(AC005058|pid:none) Homo sapiens BAC clone CTB-54D4 fr... 150 7e-55
EU116893_1(EU116893|pid:none) Barentsia elongata putative riboso... 160 1e-54
AY389939_1(AY389939|pid:none) Latimeria chalumnae ribosomal prot... 157 1e-54
EF428555_1(EF428555|pid:none) Taeniopygia guttata ribosomal prot... 150 3e-54
BT051489_1(BT051489|pid:none) Medicago truncatula clone MTYF1_F2... 154 3e-54
AM920428_592(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 159 5e-54
CP000583_158(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 154 5e-54
(P32100) RecName: Full=60S ribosomal protein L7; &AE014134_1849... 151 1e-51
AY223067_1(AY223067|pid:none) Schistosoma japonicum clone ZZD126... 150 1e-50
(Q6BTA4) RecName: Full=60S ribosomal protein L7; &CR382136_97(C... 144 1e-49
M29016_1(M29016|pid:none) Mouse ribosomal protein L7 (rpL7) mRNA... 160 2e-49
(O60143) RecName: Full=60S ribosomal protein L7-C; &AL022304_12... 151 9e-49
EU116848_1(EU116848|pid:none) Sipunculus nudus putative ribosoma... 139 3e-48
CR940352_716(CR940352|pid:none) Theileria annulata strain Ankara... 132 6e-48
FM992688_534(FM992688|pid:none) Candida dubliniensis CD36 chromo... 136 6e-48
(Q755A7) RecName: Full=60S ribosomal protein L7; &AE016819_152(... 142 1e-47
EU119279_1(EU119279|pid:none) Sterkiella histriomuscorum strain ... 135 2e-47
AY534620_1(AY534620|pid:none) Pectinaria gouldii ribosomal prote... 140 2e-46
AC159447_8(AC159447|pid:none) Trypanosoma brucei chromosome 7 cl... 129 5e-46
DQ440213_1(DQ440213|pid:none) Aedes aegypti clone AET-2196 ribos... 129 1e-44
EU934326_1(EU934326|pid:none) TSA: Anopheles darlingi AD-220 60S... 127 1e-44
AY223442_1(AY223442|pid:none) Schistosoma japonicum clone ZZZ449... 150 5e-44
AY130402_1(AY130402|pid:none) Branchiostoma lanceolatum ribosoma... 179 8e-44
X57960_1(X57960|pid:none) M.musculus mRNA for ribosomal protein ... 108 2e-42
(P17937) RecName: Full=60S ribosomal protein L7-A; &AL136235_6(... 147 2e-41
AY909398_1(AY909398|pid:none) Siniperca chuatsi clone C123 ribos... 102 6e-41
AY130404_1(AY130404|pid:none) Petromyzon marinus ribosomal prote... 165 2e-39
AY550040_1(AY550040|pid:none) Sus scrofa 60S ribosomal protein L... 99 2e-39
AM049001_1(AM049001|pid:none) Scarabaeus laticollis mRNA for rib... 164 3e-39
EU284977_1(EU284977|pid:none) TSA: Elaeis guineensis EgEfMPOB001... 114 4e-39
BT045968_1(BT045968|pid:none) Salmo salar clone ssal-rgf-537-367... 134 2e-38
DQ294270_1(DQ294270|pid:none) Solanum tuberosum clone 145H06 put... 124 2e-38
AY208994_1(AY208994|pid:none) Toxoplasma gondii wx protein mRNA,... 105 3e-38
AK317024_1(AK317024|pid:none) Arabidopsis thaliana AT2G01250 mRN... 160 4e-38
AK058490_1(AK058490|pid:none) Oryza sativa Japonica Group cDNA c... 104 8e-38
EZ000615_1(EZ000615|pid:none) TSA: Culex tarsalis Ctar-92 riboso... 103 2e-37
EU139202_1(EU139202|pid:none) Flustra foliacea putative 60S ribo... 157 3e-37
DQ347606_1(DQ347606|pid:none) Bos taurus clone A45 RPL7 mRNA, pa... 89 2e-36
BC084812_1(BC084812|pid:none) Xenopus laevis hypothetical LOC495... 120 9e-36
AY232023_1(AY232023|pid:none) Drosophila yakuba clone yak-ad_RpL... 152 1e-35
(Q5RAH8) RecName: Full=60S ribosomal protein L7-like 1; &CR8590... 127 5e-34
BC058020_1(BC058020|pid:none) Homo sapiens ribosomal protein L7-... 129 8e-34
(Q9D8M4) RecName: Full=60S ribosomal protein L7-like 1; &AK0078... 124 2e-33
AL034558_39(AL034558|pid:none) Plasmodium falciparum MAL3P2, com... 102 5e-33
EU970968_1(EU970968|pid:none) Zea mays clone 354936 60S ribosoma... 97 1e-32
BT034959_1(BT034959|pid:none) Zea mays full-length cDNA clone ZM... 95 2e-32
(A5GFQ0) RecName: Full=60S ribosomal protein L7-like 1; &CR9563... 122 2e-32
AF083031_123(AF083031|pid:none) Guillardia theta nucleomorph chr... 102 2e-31
AJ720177_1(AJ720177|pid:none) Gallus gallus mRNA for hypothetica... 132 1e-29
AM494963_16(AM494963|pid:none) Leishmania braziliensis chromosom... 125 2e-27
AM494963_17(AM494963|pid:none) Leishmania braziliensis chromosom... 125 2e-27
AM849511_1(AM849511|pid:none) Pomphorhynchus laevis partial mRNA... 124 3e-27
BC104541_1(BC104541|pid:none) Bos taurus ribosomal protein L7-li... 120 6e-26
CP000881_124(CP000881|pid:none) Hemiselmis andersenii chromosome... 118 2e-25
EU957773_1(EU957773|pid:none) Zea mays clone 1615677 unknown mRNA. 117 3e-25
AE014134_2231(AE014134|pid:none) Drosophila melanogaster chromos... 88 5e-25
AJ312334_1(AJ312334|pid:none) Oncorhynchus mykiss partial mRNA f... 113 7e-24
EU558309_1(EU558309|pid:none) Novocrania anomala putative 60S ri... 108 2e-22
AB180451_1(AB180451|pid:none) Plutella xylostella mRNA for Ribos... 107 5e-22
(Q6BIF5) RecName: Full=Ribosome biogenesis protein RLP7; &CR382... 74 5e-21
EF576305_1(EF576305|pid:none) Oryza sativa (indica cultivar-grou... 85 5e-18
(Q8SS93) RecName: Full=60S ribosomal protein L7; &AL590443_92(A... 58 1e-17
AY880348_1(AY880348|pid:none) Gekko japonicus GekBS117P mRNA, co... 88 2e-16
(Q75ET5) RecName: Full=Ribosome biogenesis protein RLP7; &AE016... 66 7e-16
AF394540_1(AF394540|pid:none) Mesocricetus auratus ribosomal pro... 85 2e-15
AY232174_1(AY232174|pid:none) Drosophila yakuba clone yak-ad_CG5... 84 5e-15
(P32102) RecName: Full=Ribosome biogenesis protein RLP7; &CR382... 57 2e-13
AK299816_1(AK299816|pid:none) Homo sapiens cDNA FLJ50850 complet... 75 2e-12
AX969909_1(AX969909|pid:none) Sequence 712 from Patent EP1104808. 68 3e-10
AY246730_1(AY246730|pid:none) Equus caballus ribosomal protein L... 68 3e-10
AK230022_1(AK230022|pid:none) Arabidopsis thaliana mRNA for At2g... 67 4e-10
(Q08953) Putative uncharacterized protein YPL197C. &AY693324_1(... 42 8e-09
BC014625_1(BC014625|pid:none) Homo sapiens eukaryotic translatio... 61 3e-08
FJ008911_1(FJ008911|pid:none) Hippoglossus hippoglossus ribosoma... 61 4e-08
CP000500_467(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 56 1e-06
(P32101) RecName: Full=Ribosome biogenesis protein RLP7; Flags: ... 54 7e-06
AC155895_1(AC155895|pid:none) Medicago truncatula chromosome 2 c... 53 1e-05
BT057681_1(BT057681|pid:none) Salmo salar clone ssal-eve-561-196... 51 3e-05
BT037760_1(BT037760|pid:none) Zea mays full-length cDNA clone ZM... 47 5e-04
CR954216_210(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 43 0.012
(A4WHQ9) RecName: Full=50S ribosomal protein L30P; &CP000660_30... 39 0.22
(A3MU87) RecName: Full=50S ribosomal protein L30P; &CP000561_76... 39 0.22
(A1RU38) RecName: Full=50S ribosomal protein L30P; &CP000504_12... 38 0.38
(Q8TRS6) RecName: Full=50S ribosomal protein L30P; &AE010299_10... 36 1.4
AM910992_303(AM910992|pid:none) Plasmodium knowlesi strain H chr... 36 1.4
(Q97BV5) RecName: Full=50S ribosomal protein L30P; &BA000011_35... 35 1.9
(Q975K1) RecName: Full=50S ribosomal protein L30P; &BA000023_45... 35 2.4
(Q9HH78) RecName: Full=50S ribosomal protein L30P; AltName: Full... 35 2.4
(Q9V1V6) RecName: Full=50S ribosomal protein L30P; &AJ248284_22... 35 2.4
(O59440) RecName: Full=50S ribosomal protein L30P; &BA000001_18... 35 3.2
CP001365_2676(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 34 5.4
(Q51922) RecName: Full=Outer membrane p25; AltName: Full=p28; Fl... 34 5.4
(Q2NFX8) RecName: Full=50S ribosomal protein L30P; &CP000102_85... 34 5.4
AL844509_525(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 34 5.4
AE016830_2212(AE016830|pid:none) Enterococcus faecalis V583, com... 34 5.4
AM778958_346(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 33 7.1
EU686618_1(EU686618|pid:none) Uncultured marine group II euryarc... 33 9.3
AF109093_1(AF109093|pid:none) Haemophilus influenzae UC9 outer m... 33 9.3
AF109097_1(AF109097|pid:none) Haemophilus influenzae UC13 outer ... 33 9.3
>(P11874) RecName: Full=60S ribosomal protein L7;
&R5DO7(S04849;S12834) &X14909_1(X14909|pid:none)
Length = 246
Score = 321 bits (823), Expect(2) = e-120
Identities = 168/183 (91%), Positives = 168/183 (91%)
Frame = +1
Query: 7 MSQKVATKTAPVPESILKKRATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYH 186
MSQKVATKTAPVPESILKKRATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYH
Sbjct: 1 MSQKVATKTAPVPESILKKRATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYH 60
Query: 187 KTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSXXXXXXXXXXXXXXXNNGVF 366
KTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVS NNGVF
Sbjct: 61 KTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVF 120
Query: 367 VKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKF 546
VKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKF
Sbjct: 121 VKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKF 180
Query: 547 GII 555
GII
Sbjct: 181 GII 183
Score = 135 bits (341), Expect(2) = e-120
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 557 CVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLXH 736
CVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNL H
Sbjct: 184 CVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIH 243
Query: 737 R 739
R
Sbjct: 244 R 244
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3019103
Number of Hits to DB: 1,198,708,791
Number of extensions: 23399449
Number of successful extensions: 52858
Number of sequences better than 10.0: 156
Number of HSP's gapped: 52697
Number of HSP's successfully gapped: 275
Length of query: 254
Length of database: 979,498,206
Length adjustment: 125
Effective length of query: 129
Effective length of database: 602,110,331
Effective search space: 77672232699
Effective search space used: 77672232699
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
Dictyostelium discoideum cDNA Project Home