Dictyostelium discoideum cDNA Clone VSF754

Sequence VSF754

AGAAAATGCC TCACTCATTC GGTCTCCGTG CTCGTACCAG ATACTTGTTC
TCTCGTGGTT TCAGAAACCA TGGTCTCTTA CAAACCACCA CCTTCTTAAG
AACTTTCCGT TTAGGTGATT ACGTTGATAT CAAAGCCACC GGTAATGTAC
ACAAAGGTAT GCCACACAAA TTCTACCACG GTCGTACCGG TCGTGTTTGG
AATGTTACTC CACGTGCTGT TGGTGTCATC ATCAACAAAC GTGTTGGTCC
AAGAATCATT GCCAAGAAAA TCCACGTCAG AACTGAACAC GTCAAACCAT
CAAACTCCAT GGCTGCTCAC TTAAAACGTA TCCAAGAAAA CAAAAAAGCT
GTCGTTGAAG CCAAGAAAGC CGGTAAATGG GTCGATGTTA GACGTAACCC
AGCTGCACCA AAGGACGGTT TCTTTGTCAA CCCAAGAAAC ACTGAATTCG
TTGAAGTCAA ACCAGTCAAA TACGAACTTT TATTATAAAT TAATTTAAAA
GAGTGGTGGC TAATATGGTT CAATCGCAAT CCTTTGATTA TCCAAATTTG
TCTTATTTAA AAAAGAAAAA TAAAAAAAAA TTT------- ---TTCTCTC
GTGGTTTCAG AAACCATGGT NTCTTACAAA CCACCACCTT CTTAAGAACT
TTCCGTTTAG GTGATTACGT TGAAATCAAA GCCACCGGTA ATGTACACAA
AGGTATGCCA CACAAAATTC TACCACGGTC GTACCGGTNG TGTTTGGAAT
GTTACTCCAC GTGCTGTTGG TGTCATCATC AACAAACGTG TTGGTCCAAG
AATCATTGCC AAGAAAATCC ACGTCAGAAC TGAACACGTC AAACCATCAA
ACTCCATGGC TGCTCACTTA AAACGTATCC AAGAAAACAA AAAAGCTGTC
GTTGAAGCCA AGAAAGCCGG TAAATGGGTC GATGTTAGAC GTAACCCAGC
TGCACCAAAG GACGGTTTCT TTGTCAACCC AAGAAACACT GAATTCGTTG
AAGTCAAACC AGTCAAATAC GAACTTTTAT TATAAATTAA TTTAAAAGAG
TGGGGCTAAT ATGGTTCAAT CGCAATCCTT GATTANCCAA ATTTGTNCTT
ATTTAAAAAA GAAAAAAAAA AAAAA

Translated Amino Acid Sequence VSF754

enaslirspcsyqilvlswfqkpwsltnhhllknfpfr*lr*yqshr*ctqryatqilpr
syrsclecystccwchhqqtcwsknhcqenprqn*trqtiklhgcslktyprkqkscr*s
qesr*mgrc*t*psctkgrflcqpkkh*ir*sqtsqirtfiin*FKRVVANMVQSQSFDY
PNLSYLKKKNKKKF---

---FSRGFRNHGXLQTTTFLRTFRLGDYVEIKATGNVHKGMPHKILPRSYRXCLECYSTC
CWCHHQQTCWSKNHCQENPRQN*trqtiklhgcslktyprkqkscr*sqesr*mgrc*t*
psctkgrflcqpkkh*ir*sqtsqirtfiin*fkrvgliwfnrnp*lxkfvli*krkkkk

Homology VSF754 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1106   0.0
VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1106   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1106   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1106   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1106   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1106   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1102   0.0
VSA718 (VSA718Q) /CSM/VS/VSA7-A/VSA718Q.Seq.d/                       1100   0.0
VSB776 (VSB776Q) /CSM/VS/VSB7-D/VSB776Q.Seq.d/                       1094   0.0
VSI403 (VSI403Q) /CSM/VS/VSI4-A/VSI403Q.Seq.d/                       1092   0.0

Homology VSF754 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU265734) Dictyostelium discoideum vegetative cDNA clone:VS...  1106   0.0    1
(BJ424534) Dictyostelium discoideum cDNA clone:ddv52d19, 5' ...  1106   0.0    1
(BJ422514) Dictyostelium discoideum cDNA clone:ddv46m05, 5' ...  1106   0.0    1
(BJ415743) Dictyostelium discoideum cDNA clone:ddv23g17, 5' ...  1106   0.0    1
(BJ414431) Dictyostelium discoideum cDNA clone:ddv19k04, 5' ...  1106   0.0    1
(AU261946) Dictyostelium discoideum vegetative cDNA clone:VS...  1102   0.0    1
(AU261683) Dictyostelium discoideum vegetative cDNA clone:VS...  1100   0.0    1
(AU262240) Dictyostelium discoideum vegetative cDNA clone:VS...  1094   0.0    1
(AU261664) Dictyostelium discoideum vegetative cDNA clone:VS...  1092   0.0    1
(C23696) Dictyostelium discoideum gamete cDNA, clone FC-AK10.    1092   0.0    1

Homology VSF754 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     268   2e-70
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   150   7e-35
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr...   149   2e-34
EF146128_1(EF146128|pid:none) Populus trichocarpa clone WS0115_L...   147   5e-34
CS559802_1(CS559802|pid:none) Sequence 389 from Patent WO2006032...   145   2e-33
CS560048_1(CS560048|pid:none) Sequence 635 from Patent WO2006032...   144   5e-33
CS560034_1(CS560034|pid:none) Sequence 621 from Patent WO2006032...   144   5e-33
BT034854_1(BT034854|pid:none) Zea mays full-length cDNA clone ZM...   144   7e-33
AM478155_1(AM478155|pid:none) Vitis vinifera contig VV78X028183....   143   9e-33
EU959301_1(EU959301|pid:none) Zea mays clone 214730 60S ribosoma...   143   9e-33

Homology VSF754 vs Genome